RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 IGHV1-58A0A0C4DH39 117 aa13.55□□□□□ -0.24
PDE8A-211ENST00000559742 A0A1B0GX51 115 aa13.55□□□□□ -0.24
PDE8A-211ENST00000559742 FAM19A5Q7Z5A7 132 aaPredicted RBP13.55□□□□□ -0.24
PDE8A-211ENST00000559742 TMEM86BQ8N661 226 aa13.55□□□□□ -0.24
PDE8A-211ENST00000559742 MRPS36P82909 103 aaKnown RBP13.54□□□□□ -0.24
PDE8A-211ENST00000559742 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
PDE8A-211ENST00000559742 RNASE13Q5GAN3 156 aaKnown RBP13.54□□□□□ -0.24
PDE8A-211ENST00000559742 FN1P02751 2386 aaKnown RBP13.54□□□□□ -0.24
PDE8A-211ENST00000559742 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
PDE8A-211ENST00000559742 COX7CP15954 63 aa13.53□□□□□ -0.24
PDE8A-211ENST00000559742 SMR3AQ99954 134 aa13.53□□□□□ -0.24
PDE8A-211ENST00000559742 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.24
PDE8A-211ENST00000559742 A8MZ25 164 aa13.52□□□□□ -0.24
PDE8A-211ENST00000559742 ZNF415Q09FC8 603 aa13.52□□□□□ -0.24
PDE8A-211ENST00000559742 INSP01308 110 aa13.52□□□□□ -0.25
PDE8A-211ENST00000559742 STHQ8IWL8 128 aa13.52□□□□□ -0.25
PDE8A-211ENST00000559742 LINC01006Q8NI28 216 aa13.52□□□□□ -0.25
PDE8A-211ENST00000559742 FAM104AQ969W3 186 aa13.52□□□□□ -0.25
PDE8A-211ENST00000559742 A8MTW9 85 aa13.51□□□□□ -0.25
PDE8A-211ENST00000559742 C5orf38Q86SI9 138 aa13.51□□□□□ -0.25
PDE8A-211ENST00000559742 C11orf72Q8NBR9 251 aa13.51□□□□□ -0.25
PDE8A-211ENST00000559742 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
PDE8A-211ENST00000559742 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
PDE8A-211ENST00000559742 CXCL5P42830 114 aa13.5□□□□□ -0.25
PDE8A-211ENST00000559742 C2orf48Q96LS8 159 aa13.5□□□□□ -0.25
PDE8A-211ENST00000559742 VWFP04275 2813 aa13.5□□□□□ -0.25
PDE8A-211ENST00000559742 DAND5Q8N907 189 aa13.49□□□□□ -0.25
PDE8A-211ENST00000559742 CRYGAP11844 174 aa13.49□□□□□ -0.25
PDE8A-211ENST00000559742 GAGE2AQ6NT46 116 aa13.48□□□□□ -0.25
PDE8A-211ENST00000559742 PYGO1Q9Y3Y4 419 aa13.48□□□□□ -0.25
PDE8A-211ENST00000559742 OTOGQ6ZRI0 2925 aa13.48□□□□□ -0.25
PDE8A-211ENST00000559742 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
PDE8A-211ENST00000559742 DAZ4Q86SG3 579 aaKnown RBP13.48□□□□□ -0.25
PDE8A-211ENST00000559742 DAZ3Q9NR90 486 aaKnown RBP13.48□□□□□ -0.25
PDE8A-211ENST00000559742 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
PDE8A-211ENST00000559742 COX7A2LO14548 114 aa13.47□□□□□ -0.25
PDE8A-211ENST00000559742 TIMM17BO60830 172 aa13.47□□□□□ -0.25
PDE8A-211ENST00000559742 RPS28P62857 69 aaKnown RBP13.47□□□□□ -0.25
PDE8A-211ENST00000559742 EDA2RQ9HAV5 297 aa13.47□□□□□ -0.25
PDE8A-211ENST00000559742 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.46□□□□□ -0.25
PDE8A-211ENST00000559742 IGKV2-29A2NJV5 120 aaPredicted RBP13.46□□□□□ -0.25
PDE8A-211ENST00000559742 IGHV3-53P01767 116 aa13.46□□□□□ -0.26
PDE8A-211ENST00000559742 C1orf158Q8N1D5 194 aa13.46□□□□□ -0.26
PDE8A-211ENST00000559742 TRGV1A0A0A0MS02 117 aa13.45□□□□□ -0.26
PDE8A-211ENST00000559742 HIST1H4AP62805 103 aaKnown RBP13.45□□□□□ -0.26
PDE8A-211ENST00000559742 TINCRA0A1B0GVN0 87 aa13.44□□□□□ -0.26
PDE8A-211ENST00000559742 OR13C6PQ8NH95 151 aa13.43□□□□□ -0.26
PDE8A-211ENST00000559742 hADV29S1A0JD25 119 aa13.43□□□□□ -0.26
PDE8A-211ENST00000559742 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
PDE8A-211ENST00000559742 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
PDE8A-211ENST00000559742 ATOX1O00244 68 aa13.42□□□□□ -0.26
PDE8A-211ENST00000559742 RPL35AP18077 110 aaKnown RBP13.42□□□□□ -0.26
PDE8A-211ENST00000559742 TIRAPP58753 221 aa13.42□□□□□ -0.26
PDE8A-211ENST00000559742 RNASE1P07998 156 aaKnown RBP13.42□□□□□ -0.26
PDE8A-211ENST00000559742 CYSTM1Q9H1C7 97 aa13.42□□□□□ -0.26
PDE8A-211ENST00000559742 BAALC-AS2P0C853 105 aa13.41□□□□□ -0.26
PDE8A-211ENST00000559742 WIPF1O43516 503 aa13.41□□□□□ -0.26
PDE8A-211ENST00000559742 Q6ZTI0 123 aa13.41□□□□□ -0.26
PDE8A-211ENST00000559742 LINC00467Q9BRT7 94 aa13.41□□□□□ -0.26
PDE8A-211ENST00000559742 TENM1Q9UKZ4 2725 aa13.4□□□□□ -0.26
PDE8A-211ENST00000559742 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
PDE8A-211ENST00000559742 TRACP01848 142 aa13.4□□□□□ -0.26
PDE8A-211ENST00000559742 LINC00308Q8TCZ7 52 aa13.4□□□□□ -0.26
PDE8A-211ENST00000559742 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
PDE8A-211ENST00000559742 NDUFA1O15239 70 aa13.39□□□□□ -0.27
PDE8A-211ENST00000559742 NOP10Q9NPE3 64 aaKnown RBP13.38□□□□□ -0.27
PDE8A-211ENST00000559742 RS1O15537 224 aa13.37□□□□□ -0.27
PDE8A-211ENST00000559742 INAFM2P0DMQ5 153 aa13.37□□□□□ -0.27
PDE8A-211ENST00000559742 CIRBPQ14011 172 aaKnown RBP13.37□□□□□ -0.27
PDE8A-211ENST00000559742 FAM222AQ5U5X8 452 aa13.37□□□□□ -0.27
PDE8A-211ENST00000559742 UBE2D4Q9Y2X8 147 aa13.37□□□□□ -0.27
PDE8A-211ENST00000559742 KIR2DL5BQ8NHK3 375 aa13.36□□□□□ -0.27
PDE8A-211ENST00000559742 CDKN2A-AS1Q9UH64 79 aa13.36□□□□□ -0.27
PDE8A-211ENST00000559742 GIG44P09565 113 aaPredicted RBP13.35□□□□□ -0.27
PDE8A-211ENST00000559742 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
PDE8A-211ENST00000559742 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
PDE8A-211ENST00000559742 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
PDE8A-211ENST00000559742 PIK3CD-AS1Q5SR53 167 aa13.35□□□□□ -0.27
PDE8A-211ENST00000559742 C16orf95Q9H693 158 aa13.35□□□□□ -0.27
PDE8A-211ENST00000559742 NSD1Q96L73 2696 aaPredicted RBP13.35□□□□□ -0.27
PDE8A-211ENST00000559742 HILS1P60008 231 aa13.34□□□□□ -0.27
PDE8A-211ENST00000559742 TMEM258P61165 79 aa13.34□□□□□ -0.27
PDE8A-211ENST00000559742 SOSTDC1Q6X4U4 206 aa13.34□□□□□ -0.27
PDE8A-211ENST00000559742 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.27
PDE8A-211ENST00000559742 A0A0U1RRA0 63 aa13.33□□□□□ -0.27
PDE8A-211ENST00000559742 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
PDE8A-211ENST00000559742 Q9H8V8 135 aa13.32□□□□□ -0.28
PDE8A-211ENST00000559742 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
PDE8A-211ENST00000559742 ATRQ13535 2644 aa13.32□□□□□ -0.28
PDE8A-211ENST00000559742 DGAT2L7PQ6IED9 249 aa13.31□□□□□ -0.28
PDE8A-211ENST00000559742 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
PDE8A-211ENST00000559742 OXTP01178 125 aa13.31□□□□□ -0.28
PDE8A-211ENST00000559742 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
PDE8A-211ENST00000559742 UPK3BQ9BT76 320 aa13.31□□□□□ -0.28
PDE8A-211ENST00000559742 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
PDE8A-211ENST00000559742 IGLV5-45A0A087WSX0 123 aa13.3□□□□□ -0.28
PDE8A-211ENST00000559742 KRTAP10-3P60369 221 aa13.3□□□□□ -0.28
PDE8A-211ENST00000559742 MALP21145 153 aa13.3□□□□□ -0.28
PDE8A-211ENST00000559742 Q9HAA7 133 aa13.3□□□□□ -0.28
PDE8A-211ENST00000559742 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms