RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SMIM1B2RUZ4 78 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 TCL1BO95988 128 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 DEFB130BP0DP73 79 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 DEFB130AP0DP74 79 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 NPC2P61916 151 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 MIAQ16674 131 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 ETDBQ3ZM63 59 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 X6R8D5 127 aa7.78□□□□□ -1.16
SPG11-217ENST00000559511 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.77□□□□□ -1.17
SPG11-217ENST00000559511 H7C2G1 150 aa7.77□□□□□ -1.17
SPG11-217ENST00000559511 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
SPG11-217ENST00000559511 LINC00612Q8N6U2 182 aa7.77□□□□□ -1.17
SPG11-217ENST00000559511 F5H768 121 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 SMAGPQ0VAQ4 97 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 DAND5Q8N907 189 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 KIR2DL5BQ8NHK3 375 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 GAGE6Q13070 117 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 LYRM7Q5U5X0 104 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 WFDC9Q8NEX5 89 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 Q9H8V8 135 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 ERG28Q9UKR5 140 aa7.76□□□□□ -1.17
SPG11-217ENST00000559511 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
SPG11-217ENST00000559511 H7C423 109 aa7.75□□□□□ -1.17
SPG11-217ENST00000559511 TIMM17BO60830 172 aa7.75□□□□□ -1.17
SPG11-217ENST00000559511 IGLV4-60A0A075B6I1 120 aa7.75□□□□□ -1.17
SPG11-217ENST00000559511 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
SPG11-217ENST00000559511 TRBV20-1A0A075B6N2 111 aa7.74□□□□□ -1.17
SPG11-217ENST00000559511 KRTAP24-1Q3LI83 254 aa7.74□□□□□ -1.17
SPG11-217ENST00000559511 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
SPG11-217ENST00000559511 WIPF1O43516 503 aa7.73□□□□□ -1.17
SPG11-217ENST00000559511 Q1RN00 199 aa7.73□□□□□ -1.17
SPG11-217ENST00000559511 SMIM9A6NGZ8 99 aa7.73□□□□□ -1.17
SPG11-217ENST00000559511 CHCHD5Q9BSY4 110 aa7.73□□□□□ -1.17
SPG11-217ENST00000559511 IGKV3OR2-268A0A0C4DH90 116 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 GYPEP15421 78 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 DEFB135Q30KP9 77 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 A0A0U1RRA0 63 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 DEFB4AO15263 64 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 IFITM1P13164 125 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 FAM222AQ5U5X8 452 aa7.72□□□□□ -1.17
SPG11-217ENST00000559511 TRIAP1O43715 76 aa7.71□□□□□ -1.18
SPG11-217ENST00000559511 CIRBPQ14011 172 aaKnown RBP7.71□□□□□ -1.18
SPG11-217ENST00000559511 PRIMA1Q86XR5 153 aa7.71□□□□□ -1.18
SPG11-217ENST00000559511 RNF183Q96D59 192 aa7.71□□□□□ -1.18
SPG11-217ENST00000559511 ATP6V0E2Q8NHE4 81 aa7.7□□□□□ -1.18
SPG11-217ENST00000559511 TRBV30A0A0K0K1B3 111 aa7.7□□□□□ -1.18
SPG11-217ENST00000559511 SOSTDC1Q6X4U4 206 aa7.7□□□□□ -1.18
SPG11-217ENST00000559511 LINC00308Q8TCZ7 52 aa7.7□□□□□ -1.18
SPG11-217ENST00000559511 A0A096LPF7 62 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 APOC4P55056 127 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 PRO0255Q9UI72 69 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 IGHV3OR16-9A0A0B4J2B5 98 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 FOXI1Q12951 378 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
SPG11-217ENST00000559511 FBN1P35555 2871 aaKnown RBP7.68□□□□□ -1.18
SPG11-217ENST00000559511 CMYA5Q8N3K9 4069 aa7.68□□□□□ -1.18
SPG11-217ENST00000559511 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
SPG11-217ENST00000559511 LYRM9A8MSI8 78 aa7.68□□□□□ -1.18
SPG11-217ENST00000559511 J3QR89 54 aa7.68□□□□□ -1.18
SPG11-217ENST00000559511 RPL13AP40429 203 aaKnown RBP7.68□□□□□ -1.18
SPG11-217ENST00000559511 C9JAW5 83 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 HERV-K104P63124 156 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 COX7B2Q8TF08 81 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 STAB1Q9NY15 2570 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 SLC25A20O43772 301 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 IGHV4-30-4P0DP06 118 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 TEN1Q86WV5 123 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 CARD19Q96LW7 228 aa7.67□□□□□ -1.18
SPG11-217ENST00000559511 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 TMEM262E9PQX1 116 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 PAX4O43316 350 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 ATXN8Q156A1 80 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 ANKRD29Q8N6D5 301 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 TOMM7Q9P0U1 55 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 CELA1Q9UNI1 258 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 ANK2Q01484 3957 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 A0A087WZ39 114 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 C5orf38Q86SI9 138 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 C3orf56Q8N813 242 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 Q8NAQ8 132 aa7.66□□□□□ -1.18
SPG11-217ENST00000559511 A0A1B0GUV1 79 aa7.65□□□□□ -1.18
SPG11-217ENST00000559511 GAGE12HA6NDE8 117 aa7.65□□□□□ -1.18
SPG11-217ENST00000559511 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
SPG11-217ENST00000559511 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 CLPSL2Q6UWE3 100 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 CLEC2BQ92478 149 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 DAD1P61803 113 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 SHISA2Q6UWI4 295 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 SPATA25Q9BR10 227 aa7.64□□□□□ -1.19
SPG11-217ENST00000559511 M0QXV9 152 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 MIFP14174 115 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 XCL1P47992 114 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 COPS9Q8WXC6 57 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 TRAV26-1A0A087WT03 109 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 COX6CP09669 75 aa7.63□□□□□ -1.19
SPG11-217ENST00000559511 Q8N3U1 123 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms