RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 UBE2L6O14933 153 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE7O76087 117 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE12FP0CL80 117 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE12GP0CL81 117 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 GAGE12IP0CL82 117 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 HERV-K104P63124 156 aa11.74□□□□□ -0.53
SPG11-215ENST00000559193 ITPR3Q14573 2671 aa11.73□□□□□ -0.53
SPG11-215ENST00000559193 C16orf74Q96GX8 76 aa11.73□□□□□ -0.53
SPG11-215ENST00000559193 TRGV2A0A075B6R0 118 aa11.72□□□□□ -0.53
SPG11-215ENST00000559193 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
SPG11-215ENST00000559193 APCP25054 2843 aa11.71□□□□□ -0.53
SPG11-215ENST00000559193 FAM240AA0A1B0GVK7 77 aa11.71□□□□□ -0.53
SPG11-215ENST00000559193 RPL35AP18077 110 aaKnown RBP11.71□□□□□ -0.53
SPG11-215ENST00000559193 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
SPG11-215ENST00000559193 Q6Q795 121 aa11.71□□□□□ -0.54
SPG11-215ENST00000559193 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
SPG11-215ENST00000559193 SETXQ7Z333 2677 aaKnown RBP11.7□□□□□ -0.54
SPG11-215ENST00000559193 TRBV6-4A0A1B0GX49 114 aa11.7□□□□□ -0.54
SPG11-215ENST00000559193 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
SPG11-215ENST00000559193 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
SPG11-215ENST00000559193 NDUFV3P56181 108 aaKnown RBP11.69□□□□□ -0.54
SPG11-215ENST00000559193 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
SPG11-215ENST00000559193 PPDPFQ9H3Y8 114 aa11.69□□□□□ -0.54
SPG11-215ENST00000559193 NF1P21359 2839 aa11.69□□□□□ -0.54
SPG11-215ENST00000559193 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
SPG11-215ENST00000559193 GAGE6Q13070 117 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 OVOL2Q9BRP0 275 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 JMJD1CQ15652 2540 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 MRPL23Q16540 153 aaKnown RBP11.68□□□□□ -0.54
SPG11-215ENST00000559193 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
SPG11-215ENST00000559193 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
SPG11-215ENST00000559193 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
SPG11-215ENST00000559193 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
SPG11-215ENST00000559193 IGLV4-60A0A075B6I1 120 aa11.66□□□□□ -0.54
SPG11-215ENST00000559193 FAM110AQ9BQ89 295 aa11.66□□□□□ -0.54
SPG11-215ENST00000559193 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
SPG11-215ENST00000559193 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
SPG11-215ENST00000559193 TRACP01848 142 aa11.66□□□□□ -0.54
SPG11-215ENST00000559193 MIR7-3HGQ8N6C7 128 aa11.65□□□□□ -0.54
SPG11-215ENST00000559193 FHL2Q14192 279 aa11.65□□□□□ -0.55
SPG11-215ENST00000559193 TOMM7Q9P0U1 55 aa11.65□□□□□ -0.55
SPG11-215ENST00000559193 NBPF19A0A087WUL8 3843 aa11.64□□□□□ -0.55
SPG11-215ENST00000559193 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
SPG11-215ENST00000559193 C16orf95Q9H693 158 aa11.64□□□□□ -0.55
SPG11-215ENST00000559193 C22orf24Q9Y442 160 aa11.64□□□□□ -0.55
SPG11-215ENST00000559193 FLNAP21333 2647 aaKnown RBP11.64□□□□□ -0.55
SPG11-215ENST00000559193 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 LINC00337Q8N6G1 96 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 IGKV2-28A0A075B6P5 120 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 IGHV3OR16-9A0A0B4J2B5 98 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 IGKV2D-28P01615 120 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 FAM222AQ5U5X8 452 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 HIST2H2BCQ6DN03 193 aa11.63□□□□□ -0.55
SPG11-215ENST00000559193 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
SPG11-215ENST00000559193 CRPP02741 224 aa11.62□□□□□ -0.55
SPG11-215ENST00000559193 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
SPG11-215ENST00000559193 SETD2Q9BYW2 2564 aaPredicted RBP11.62□□□□□ -0.55
SPG11-215ENST00000559193 PF4P02776 101 aa11.62□□□□□ -0.55
SPG11-215ENST00000559193 RPL28P46779 137 aaKnown RBP11.62□□□□□ -0.55
SPG11-215ENST00000559193 CHCHD5Q9BSY4 110 aa11.62□□□□□ -0.55
SPG11-215ENST00000559193 BAALC-AS2P0C853 105 aa11.61□□□□□ -0.55
SPG11-215ENST00000559193 SND1-IT1Q9HBX3 110 aa11.61□□□□□ -0.55
SPG11-215ENST00000559193 SS18L2Q9UHA2 77 aa11.6□□□□□ -0.55
SPG11-215ENST00000559193 TRBV7-7A0A0K0K1E9 115 aa11.59□□□□□ -0.55
SPG11-215ENST00000559193 LINC00158P58513 81 aa11.59□□□□□ -0.55
SPG11-215ENST00000559193 A0A087WZ39 114 aa11.59□□□□□ -0.55
SPG11-215ENST00000559193 ACYP1P07311 99 aa11.59□□□□□ -0.55
SPG11-215ENST00000559193 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
SPG11-215ENST00000559193 Q9HAA7 133 aa11.58□□□□□ -0.56
SPG11-215ENST00000559193 CCL18P55774 89 aa11.58□□□□□ -0.56
SPG11-215ENST00000559193 C5orf38Q86SI9 138 aa11.58□□□□□ -0.56
SPG11-215ENST00000559193 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.56
SPG11-215ENST00000559193 B5MCH6 92 aa11.57□□□□□ -0.56
SPG11-215ENST00000559193 ANK3Q12955 4377 aaKnown RBP11.56□□□□□ -0.56
SPG11-215ENST00000559193 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
SPG11-215ENST00000559193 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
SPG11-215ENST00000559193 DEFB130BP0DP73 79 aa11.56□□□□□ -0.56
SPG11-215ENST00000559193 DEFB130AP0DP74 79 aa11.56□□□□□ -0.56
SPG11-215ENST00000559193 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
SPG11-215ENST00000559193 A0A087WYN8 130 aa11.54□□□□□ -0.56
SPG11-215ENST00000559193 MALP21145 153 aa11.54□□□□□ -0.56
SPG11-215ENST00000559193 PFN2P35080 140 aa11.54□□□□□ -0.56
SPG11-215ENST00000559193 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
SPG11-215ENST00000559193 KIR2DL5BQ8NHK3 375 aa11.53□□□□□ -0.56
SPG11-215ENST00000559193 GYPEP15421 78 aa11.52□□□□□ -0.56
SPG11-215ENST00000559193 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.56
SPG11-215ENST00000559193 C11orf68Q9H3H3 251 aaKnown RBP11.52□□□□□ -0.57
SPG11-215ENST00000559193 ACANP16112 2415 aa11.51□□□□□ -0.57
SPG11-215ENST00000559193 MTORP42345 2549 aa11.51□□□□□ -0.57
SPG11-215ENST00000559193 INAFM2P0DMQ5 153 aa11.51□□□□□ -0.57
SPG11-215ENST00000559193 LINC00643Q86TS7 51 aa11.51□□□□□ -0.57
SPG11-215ENST00000559193 XCL1P47992 114 aa11.5□□□□□ -0.57
SPG11-215ENST00000559193 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
SPG11-215ENST00000559193 PAX4O43316 350 aa11.49□□□□□ -0.57
SPG11-215ENST00000559193 HILS1P60008 231 aa11.49□□□□□ -0.57
SPG11-215ENST00000559193 PDZD2O15018 2839 aa11.49□□□□□ -0.57
SPG11-215ENST00000559193 DNAL4O96015 105 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms