RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 IFI27P40305 119 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-210ENST00000559092 HNRNPA3P51991 378 aaKnown RBP11.09□□□□□ -0.63
SMAD3-210ENST00000559092 Q8N8P6 123 aa11.09□□□□□ -0.63
SMAD3-210ENST00000559092 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
SMAD3-210ENST00000559092 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
SMAD3-210ENST00000559092 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 LOC389332A0A1B0GUA5 103 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 F8WDY8 70 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 K7EMI3 77 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 IFITM2Q01629 132 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 CTDSP1Q9GZU7 261 aa11.08□□□□□ -0.64
SMAD3-210ENST00000559092 IFITM10A6NMD0 228 aa11.07□□□□□ -0.64
SMAD3-210ENST00000559092 Q6ZRU5 148 aa11.07□□□□□ -0.64
SMAD3-210ENST00000559092 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
SMAD3-210ENST00000559092 TRAV9-1A0A075B6T8 112 aa11.06□□□□□ -0.64
SMAD3-210ENST00000559092 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
SMAD3-210ENST00000559092 RNF151Q2KHN1 245 aa11.06□□□□□ -0.64
SMAD3-210ENST00000559092 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
SMAD3-210ENST00000559092 IGLV4-3A0A075B6K6 122 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 NPSP0C0P6 89 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 SPAG11BQ08648 103 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 CYSLTR1Q9Y271 337 aa11.05□□□□□ -0.64
SMAD3-210ENST00000559092 SEC11CQ9BY50 192 aa11.04□□□□□ -0.64
SMAD3-210ENST00000559092 NXT2Q9NPJ8 142 aaKnown RBP11.04□□□□□ -0.64
SMAD3-210ENST00000559092 TGIF2-C20orf24A0A0A6YYL0 155 aa11.03□□□□□ -0.64
SMAD3-210ENST00000559092 G0S2P27469 103 aa11.03□□□□□ -0.64
SMAD3-210ENST00000559092 C2orf66Q6UXQ4 117 aa11.03□□□□□ -0.64
SMAD3-210ENST00000559092 ORAOV1Q8WV07 137 aa11.03□□□□□ -0.64
SMAD3-210ENST00000559092 MRPL35Q9NZE8 188 aaKnown RBP11.03□□□□□ -0.64
SMAD3-210ENST00000559092 A0A087WZ39 114 aa11.02□□□□□ -0.65
SMAD3-210ENST00000559092 GAGE2BQ13066 116 aa11.02□□□□□ -0.65
SMAD3-210ENST00000559092 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
SMAD3-210ENST00000559092 TEX43Q6ZNM6 134 aa11.02□□□□□ -0.65
SMAD3-210ENST00000559092 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-210ENST00000559092 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
SMAD3-210ENST00000559092 Q6ZN92 141 aa11.01□□□□□ -0.65
SMAD3-210ENST00000559092 C2orf88Q9BSF0 95 aa11.01□□□□□ -0.65
SMAD3-210ENST00000559092 NDUFA1O15239 70 aa11□□□□□ -0.65
SMAD3-210ENST00000559092 S100PP25815 95 aa11□□□□□ -0.65
SMAD3-210ENST00000559092 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
SMAD3-210ENST00000559092 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
SMAD3-210ENST00000559092 AMELXQ99217 191 aa11□□□□□ -0.65
SMAD3-210ENST00000559092 VCX2Q9H322 139 aa11□□□□□ -0.65
SMAD3-210ENST00000559092 IGIPA6NJ69 53 aa10.99□□□□□ -0.65
SMAD3-210ENST00000559092 UBE2D1P51668 147 aa10.99□□□□□ -0.65
SMAD3-210ENST00000559092 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
SMAD3-210ENST00000559092 PAPPA-AS1Q5QFB9 102 aa10.98□□□□□ -0.65
SMAD3-210ENST00000559092 COMMD7Q86VX2 200 aa10.98□□□□□ -0.65
SMAD3-210ENST00000559092 COX19Q49B96 90 aa10.97□□□□□ -0.65
SMAD3-210ENST00000559092 C10orf91Q5T1B1 145 aa10.97□□□□□ -0.65
SMAD3-210ENST00000559092 A0A0J9YXV3 536 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 A0A1W2PNN7 141 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 TLX1NBP0CAT3 122 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 RPL18AQ02543 176 aaKnown RBP10.96□□□□□ -0.65
SMAD3-210ENST00000559092 KIAA0087Q14695 138 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 KIAA1644Q3SXP7 199 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 Q6ZRP5 223 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 FAM19A3Q7Z5A8 133 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
SMAD3-210ENST00000559092 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-210ENST00000559092 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
SMAD3-210ENST00000559092 LINC00173Q6ZV60 143 aa10.95□□□□□ -0.66
SMAD3-210ENST00000559092 TOMM6Q96B49 74 aa10.95□□□□□ -0.66
SMAD3-210ENST00000559092 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
SMAD3-210ENST00000559092 SEC11AP67812 179 aa10.94□□□□□ -0.66
SMAD3-210ENST00000559092 RHEBQ15382 184 aa10.94□□□□□ -0.66
SMAD3-210ENST00000559092 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
SMAD3-210ENST00000559092 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
SMAD3-210ENST00000559092 MT1HL1P0DM35 61 aa10.93□□□□□ -0.66
SMAD3-210ENST00000559092 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
SMAD3-210ENST00000559092 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
SMAD3-210ENST00000559092 ALKBH7Q9BT30 221 aaPredicted RBP10.93□□□□□ -0.66
SMAD3-210ENST00000559092 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
SMAD3-210ENST00000559092 LINC01546A6NGU7 62 aa10.92□□□□□ -0.66
SMAD3-210ENST00000559092 MT-ND6P03923 174 aa10.92□□□□□ -0.66
SMAD3-210ENST00000559092 ERASQ7Z444 233 aa10.92□□□□□ -0.66
SMAD3-210ENST00000559092 HERVK_113P63121 156 aa10.91□□□□□ -0.66
SMAD3-210ENST00000559092 SRSF9Q13242 221 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMAD3-210ENST00000559092 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
SMAD3-210ENST00000559092 RPS10P5Q9NQ39 176 aa10.9□□□□□ -0.66
SMAD3-210ENST00000559092 HMCN2Q8NDA2 5059 aa10.89□□□□□ -0.67
SMAD3-210ENST00000559092 PRSS2P07478 247 aa10.89□□□□□ -0.67
SMAD3-210ENST00000559092 PACRGQ96M98 296 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-210ENST00000559092 LINC01600Q96MT4 127 aa10.89□□□□□ -0.67
SMAD3-210ENST00000559092 GEMIN7Q9H840 131 aaKnown RBP10.89□□□□□ -0.67
SMAD3-210ENST00000559092 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
SMAD3-210ENST00000559092 C6orf226Q5I0X4 101 aa10.88□□□□□ -0.67
SMAD3-210ENST00000559092 C2orf82Q6UX34 121 aa10.88□□□□□ -0.67
SMAD3-210ENST00000559092 Q8IZM0 81 aa10.88□□□□□ -0.67
SMAD3-210ENST00000559092 MRPL18Q9H0U6 180 aaKnown RBP10.88□□□□□ -0.67
SMAD3-210ENST00000559092 NDUFC2-KCTD14E9PQ53 114 aa10.87□□□□□ -0.67
SMAD3-210ENST00000559092 REG3GQ6UW15 175 aa10.87□□□□□ -0.67
SMAD3-210ENST00000559092 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
SMAD3-210ENST00000559092 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
SMAD3-210ENST00000559092 CKS1BP61024 79 aa10.86□□□□□ -0.67
SMAD3-210ENST00000559092 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms