RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CDK2AP2O75956 126 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 NPSP0C0P6 89 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
SNX1-204ENST00000559061 SMAGPQ0VAQ4 97 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 FA2HQ7L5A8 372 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
SNX1-204ENST00000559061 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 PANO1I0J062 215 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 LINC00614P0C842 121 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 C14orf177Q52M58 125 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
SNX1-204ENST00000559061 NUPR1O60356 82 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 TEX43Q6ZNM6 134 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 ERASQ7Z444 233 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 C9orf163Q8N9P6 203 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 KRTAP4-5Q9BYR2 181 aa7.36□□□□□ -1.23
SNX1-204ENST00000559061 IGHV1-58A0A0C4DH39 117 aa7.35□□□□□ -1.23
SNX1-204ENST00000559061 COX7A2LO14548 114 aa7.35□□□□□ -1.23
SNX1-204ENST00000559061 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
SNX1-204ENST00000559061 ABCA13Q86UQ4 5058 aa7.34□□□□□ -1.23
SNX1-204ENST00000559061 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
SNX1-204ENST00000559061 SDIM1Q6ZPB5 146 aa7.34□□□□□ -1.23
SNX1-204ENST00000559061 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
SNX1-204ENST00000559061 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
SNX1-204ENST00000559061 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 A0A087WZ39 114 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 A0A0J9YXV3 536 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 HBDP02042 147 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 KIAA0087Q14695 138 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 CHCHD1Q96BP2 118 aaKnown RBP7.33□□□□□ -1.24
SNX1-204ENST00000559061 VCX2Q9H322 139 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 CST9LQ9H4G1 147 aa7.33□□□□□ -1.24
SNX1-204ENST00000559061 IGLV4-69A0A075B6H9 119 aa7.32□□□□□ -1.24
SNX1-204ENST00000559061 SERF1AO75920 110 aa7.32□□□□□ -1.24
SNX1-204ENST00000559061 G0S2P27469 103 aa7.32□□□□□ -1.24
SNX1-204ENST00000559061 CFAP161Q6P656 301 aa7.32□□□□□ -1.24
SNX1-204ENST00000559061 Q6ZN92 141 aa7.32□□□□□ -1.24
SNX1-204ENST00000559061 VPS13BQ7Z7G8 4022 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 IGLV5-45A0A087WSX0 123 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 CIRBPQ14011 172 aaKnown RBP7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
SNX1-204ENST00000559061 Q6ZRU5 148 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 FAM19A2Q8N3H0 131 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 C2orf88Q9BSF0 95 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 CDKN2A-AS1Q9UH64 79 aa7.31□□□□□ -1.24
SNX1-204ENST00000559061 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 RAB5BP61020 215 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 SPAG11BQ08648 103 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 PMVKQ15126 192 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 SCXQ7RTU7 201 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 ORAOV1Q8WV07 137 aa7.3□□□□□ -1.24
SNX1-204ENST00000559061 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.29□□□□□ -1.24
SNX1-204ENST00000559061 IGLC3P0DOY3 106 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 MALP21145 153 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 BAGE3Q86Y29 109 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 OR10D4PQ8NGN7 298 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
SNX1-204ENST00000559061 TINCRA0A1B0GVN0 87 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 S100A1P23297 94 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 CIRBP-AS1Q8TBR5 109 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 CARD19Q96LW7 228 aa7.28□□□□□ -1.24
SNX1-204ENST00000559061 A0A096LNI7 61 aa7.27□□□□□ -1.25
SNX1-204ENST00000559061 HERVK_113P63121 156 aa7.27□□□□□ -1.25
SNX1-204ENST00000559061 Q8N1X5 172 aa7.27□□□□□ -1.25
SNX1-204ENST00000559061 SPACA4Q8TDM5 124 aa7.27□□□□□ -1.25
SNX1-204ENST00000559061 CHAC1Q9BUX1 264 aa7.27□□□□□ -1.25
SNX1-204ENST00000559061 C11orf86A6NJI1 115 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 ZNF561-AS1K7EIQ3 104 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 HSBP1O75506 76 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 ATP5LO75964 103 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 APOMO95445 188 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
SNX1-204ENST00000559061 ZNF22P17026 224 aaPredicted RBP7.26□□□□□ -1.25
SNX1-204ENST00000559061 C2orf82Q6UX34 121 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 IFI27L1Q96BM0 104 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
SNX1-204ENST00000559061 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms