RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HBDP02042 147 aa11.49□□□□□ -0.57
TPM1-214ENST00000558544 FUSP35637 526 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPM1-214ENST00000558544 FOXI1Q12951 378 aa11.49□□□□□ -0.57
TPM1-214ENST00000558544 LINC00173Q6ZV60 143 aa11.49□□□□□ -0.57
TPM1-214ENST00000558544 ERASQ7Z444 233 aa11.49□□□□□ -0.57
TPM1-214ENST00000558544 LINC01549A6NIU2 74 aa11.48□□□□□ -0.57
TPM1-214ENST00000558544 NPSP0C0P6 89 aa11.48□□□□□ -0.57
TPM1-214ENST00000558544 VCX2Q9H322 139 aa11.48□□□□□ -0.57
TPM1-214ENST00000558544 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
TPM1-214ENST00000558544 AMELXQ99217 191 aa11.47□□□□□ -0.57
TPM1-214ENST00000558544 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
TPM1-214ENST00000558544 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.57
TPM1-214ENST00000558544 PAPPA-AS1Q5QFB9 102 aa11.45□□□□□ -0.58
TPM1-214ENST00000558544 UBE2D1P51668 147 aa11.44□□□□□ -0.58
TPM1-214ENST00000558544 C14orf177Q52M58 125 aa11.44□□□□□ -0.58
TPM1-214ENST00000558544 C15orf56Q8N910 161 aa11.44□□□□□ -0.58
TPM1-214ENST00000558544 BIRC6Q9NR09 4857 aa11.44□□□□□ -0.58
TPM1-214ENST00000558544 LRP1BQ9NZR2 4599 aa11.44□□□□□ -0.58
TPM1-214ENST00000558544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
TPM1-214ENST00000558544 LEPROTL1O95214 131 aa11.43□□□□□ -0.58
TPM1-214ENST00000558544 PYY3Q5JQD4 70 aa11.43□□□□□ -0.58
TPM1-214ENST00000558544 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 C16orf90A8MZG2 172 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 PRSS1P07477 247 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 KRTDAPP60985 99 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 NTN5Q8WTR8 489 aaPredicted RBP11.42□□□□□ -0.58
TPM1-214ENST00000558544 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
TPM1-214ENST00000558544 COX7A2LO14548 114 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 SMIM6P0DI80 62 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 JOSD1Q15040 202 aaPredicted RBP11.41□□□□□ -0.58
TPM1-214ENST00000558544 CDPF1Q6NVV7 123 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 hDV102S1A0JD36 115 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 MALP21145 153 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 COX6A2Q02221 97 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
TPM1-214ENST00000558544 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.59
TPM1-214ENST00000558544 ATP5LO75964 103 aa11.4□□□□□ -0.59
TPM1-214ENST00000558544 PMVKQ15126 192 aa11.4□□□□□ -0.59
TPM1-214ENST00000558544 IGHV1-58A0A0C4DH39 117 aa11.39□□□□□ -0.59
TPM1-214ENST00000558544 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
TPM1-214ENST00000558544 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
TPM1-214ENST00000558544 CST9LQ9H4G1 147 aa11.39□□□□□ -0.59
TPM1-214ENST00000558544 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
TPM1-214ENST00000558544 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
TPM1-214ENST00000558544 SYS1-DBNDD2H3BUS1 97 aa11.37□□□□□ -0.59
TPM1-214ENST00000558544 IFI27L1Q96BM0 104 aa11.37□□□□□ -0.59
TPM1-214ENST00000558544 MAP1LC3CQ9BXW4 147 aa11.37□□□□□ -0.59
TPM1-214ENST00000558544 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
TPM1-214ENST00000558544 C12orf57Q99622 126 aa11.36□□□□□ -0.59
TPM1-214ENST00000558544 APOMO95445 188 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 GCSHP23434 173 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 HERVK_113P63121 156 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 SEC11AP67812 179 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 LINC00526Q96FQ7 95 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 GEMIN7Q9H840 131 aaKnown RBP11.35□□□□□ -0.59
TPM1-214ENST00000558544 DNAH8Q96JB1 4490 aa11.35□□□□□ -0.59
TPM1-214ENST00000558544 A0A087WZ39 114 aa11.34□□□□□ -0.59
TPM1-214ENST00000558544 LINC01620Q4KN68 170 aa11.34□□□□□ -0.59
TPM1-214ENST00000558544 TINCRA0A1B0GVN0 87 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 H0Y8G0 127 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 SLPIP03973 132 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
TPM1-214ENST00000558544 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
TPM1-214ENST00000558544 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
TPM1-214ENST00000558544 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
TPM1-214ENST00000558544 KRTAP10-1P60331 282 aa11.32□□□□□ -0.6
TPM1-214ENST00000558544 CNBPP62633 177 aaKnown RBP11.32□□□□□ -0.6
TPM1-214ENST00000558544 LINC01545Q5VT33 79 aa11.32□□□□□ -0.6
TPM1-214ENST00000558544 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
TPM1-214ENST00000558544 SPAG11BQ08648 103 aa11.31□□□□□ -0.6
TPM1-214ENST00000558544 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
TPM1-214ENST00000558544 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
TPM1-214ENST00000558544 IGLC3P0DOY3 106 aa11.3□□□□□ -0.6
TPM1-214ENST00000558544 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
TPM1-214ENST00000558544 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
TPM1-214ENST00000558544 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
TPM1-214ENST00000558544 LINC01561Q8N1V8 128 aa11.29□□□□□ -0.6
TPM1-214ENST00000558544 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
TPM1-214ENST00000558544 CHTOPQ9Y3Y2 248 aaKnown RBP11.29□□□□□ -0.6
TPM1-214ENST00000558544 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
TPM1-214ENST00000558544 C20orf202A1L168 122 aa11.28□□□□□ -0.6
TPM1-214ENST00000558544 ODF1Q14990 250 aa11.28□□□□□ -0.6
TPM1-214ENST00000558544 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
TPM1-214ENST00000558544 C11orf86A6NJI1 115 aa11.27□□□□□ -0.61
TPM1-214ENST00000558544 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
TPM1-214ENST00000558544 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
TPM1-214ENST00000558544 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.61
TPM1-214ENST00000558544 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
TPM1-214ENST00000558544 SMIM1B2RUZ4 78 aa11.26□□□□□ -0.61
TPM1-214ENST00000558544 F8VRH5 84 aa11.26□□□□□ -0.61
TPM1-214ENST00000558544 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
TPM1-214ENST00000558544 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
TPM1-214ENST00000558544 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms