RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
LDLR-205ENST00000557933 H3BT86 120 aa8.82□□□□□ -1
LDLR-205ENST00000557933 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
LDLR-205ENST00000557933 KRTAP10-9P60411 292 aa8.82□□□□□ -1
LDLR-205ENST00000557933 SLPIP03973 132 aa8.81□□□□□ -1
LDLR-205ENST00000557933 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
LDLR-205ENST00000557933 NDUFA1O15239 70 aa8.81□□□□□ -1
LDLR-205ENST00000557933 TMEM89A2RUT3 159 aa8.81□□□□□ -1
LDLR-205ENST00000557933 CLPSL2Q6UWE3 100 aa8.81□□□□□ -1
LDLR-205ENST00000557933 VPREB3Q9UKI3 123 aa8.81□□□□□ -1
LDLR-205ENST00000557933 YAE1D1Q9NRH1 226 aa8.8□□□□□ -1
LDLR-205ENST00000557933 FSHBP01225 129 aa8.8□□□□□ -1
LDLR-205ENST00000557933 RPL35AP18077 110 aaKnown RBP8.8□□□□□ -1
LDLR-205ENST00000557933 MIR7-3HGQ8N6C7 128 aa8.79□□□□□ -1
LDLR-205ENST00000557933 COX7A2LO14548 114 aa8.79□□□□□ -1
LDLR-205ENST00000557933 MRPL23Q16540 153 aaKnown RBP8.79□□□□□ -1
LDLR-205ENST00000557933 IGKV3D-7A0A0C4DH55 119 aa8.78□□□□□ -1
LDLR-205ENST00000557933 INSP01308 110 aa8.78□□□□□ -1
LDLR-205ENST00000557933 TIRAPP58753 221 aa8.78□□□□□ -1
LDLR-205ENST00000557933 ODF3L2Q3SX64 289 aa8.78□□□□□ -1
LDLR-205ENST00000557933 SDIM1Q6ZPB5 146 aa8.78□□□□□ -1
LDLR-205ENST00000557933 C5orf38Q86SI9 138 aa8.78□□□□□ -1
LDLR-205ENST00000557933 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
LDLR-205ENST00000557933 A0A087WYN8 130 aa8.78□□□□□ -1
LDLR-205ENST00000557933 A0A096LPF7 62 aa8.78□□□□□ -1
LDLR-205ENST00000557933 C1orf158Q8N1D5 194 aa8.78□□□□□ -1
LDLR-205ENST00000557933 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
LDLR-205ENST00000557933 CR1P17927 2039 aa8.78□□□□□ -1
LDLR-205ENST00000557933 TENM4Q6N022 2769 aa8.78□□□□□ -1
LDLR-205ENST00000557933 IGHV4-31P0DP07 118 aa8.77□□□□□ -1
LDLR-205ENST00000557933 LINC00158P58513 81 aa8.77□□□□□ -1
LDLR-205ENST00000557933 STHQ8IWL8 128 aa8.77□□□□□ -1
LDLR-205ENST00000557933 OR13C6PQ8NH95 151 aa8.77□□□□□ -1
LDLR-205ENST00000557933 TRGV2A0A075B6R0 118 aa8.77□□□□□ -1.01
LDLR-205ENST00000557933 A0A087WVE0 104 aa8.77□□□□□ -1.01
LDLR-205ENST00000557933 HERVK_113P63121 156 aa8.77□□□□□ -1.01
LDLR-205ENST00000557933 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
LDLR-205ENST00000557933 M0QXV9 152 aa8.76□□□□□ -1.01
LDLR-205ENST00000557933 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
LDLR-205ENST00000557933 UBE2L6O14933 153 aa8.76□□□□□ -1.01
LDLR-205ENST00000557933 RNASE1P07998 156 aaKnown RBP8.76□□□□□ -1.01
LDLR-205ENST00000557933 PDZD2O15018 2839 aa8.75□□□□□ -1.01
LDLR-205ENST00000557933 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
LDLR-205ENST00000557933 PRR3P79522 188 aaKnown RBP8.75□□□□□ -1.01
LDLR-205ENST00000557933 RPL36AP83881 106 aaKnown RBP8.75□□□□□ -1.01
LDLR-205ENST00000557933 DEFB114Q30KQ6 69 aa8.75□□□□□ -1.01
LDLR-205ENST00000557933 RPL36ALQ969Q0 106 aaKnown RBP8.75□□□□□ -1.01
LDLR-205ENST00000557933 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
LDLR-205ENST00000557933 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 NCR3O14931 201 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 SND1-IT1Q9HBX3 110 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 CDC42SE2Q9NRR3 84 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 F5H768 121 aa8.74□□□□□ -1.01
LDLR-205ENST00000557933 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 K7EQD1 137 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 CRPP02741 224 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 Q6Q795 121 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 CYSTM1Q9H1C7 97 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 UNC79Q9P2D8 2635 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 WFDC9Q8NEX5 89 aa8.73□□□□□ -1.01
LDLR-205ENST00000557933 TEP1Q99973 2627 aaKnown RBP8.72□□□□□ -1.01
LDLR-205ENST00000557933 IGLV5-45A0A087WSX0 123 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 LECT2O14960 151 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 PAX4O43316 350 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 BEAN1Q3B7T3 259 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 SMIM11BQ8TCY0 68 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 EDA2RQ9HAV5 297 aa8.72□□□□□ -1.01
LDLR-205ENST00000557933 DEFB130BP0DP73 79 aa8.71□□□□□ -1.01
LDLR-205ENST00000557933 DEFB130AP0DP74 79 aa8.71□□□□□ -1.01
LDLR-205ENST00000557933 Q6YL49 198 aa8.71□□□□□ -1.01
LDLR-205ENST00000557933 ESM1Q9NQ30 184 aa8.71□□□□□ -1.01
LDLR-205ENST00000557933 TENM1Q9UKZ4 2725 aa8.71□□□□□ -1.02
LDLR-205ENST00000557933 FASNP49327 2511 aaKnown RBP8.71□□□□□ -1.02
LDLR-205ENST00000557933 DNAL4O96015 105 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 XCL1P47992 114 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 TRRAPQ9Y4A5 3859 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 TIMM17BO60830 172 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 PKD1L1Q8TDX9 2849 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 HECTD1Q9ULT8 2610 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 MALP21145 153 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 HIST2H2BCQ6DN03 193 aa8.7□□□□□ -1.02
LDLR-205ENST00000557933 ATRQ13535 2644 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 TRGV4A0A0C4DH28 118 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 CCL18P55774 89 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 TMEM243Q9BU79 118 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
LDLR-205ENST00000557933 Q8N3U1 123 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
LDLR-205ENST00000557933 DEFB121Q5J5C9 76 aa8.68□□□□□ -1.02
LDLR-205ENST00000557933 IGLV10-54A0A075B6I4 117 aa8.68□□□□□ -1.02
LDLR-205ENST00000557933 hADV29S1A0JD25 119 aa8.68□□□□□ -1.02
LDLR-205ENST00000557933 TMEM86BQ8N661 226 aa8.68□□□□□ -1.02
LDLR-205ENST00000557933 DNAJC30Q96LL9 226 aa8.68□□□□□ -1.02
LDLR-205ENST00000557933 LINC00846Q9NV44 126 aa8.67□□□□□ -1.02
LDLR-205ENST00000557933 HIVEP1P15822 2718 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms