RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-227	ENST00000557554	GATC	O43716	136 aa	Known RBP	5.77	□□□□□ -1.49
ABCD4-227	ENST00000557554	RAB4A	P20338	218 aa		5.77	□□□□□ -1.49
ABCD4-227	ENST00000557554	AMN1	Q8IY45	258 aa		5.77	□□□□□ -1.49
ABCD4-227	ENST00000557554	FAM210A	Q96ND0	272 aa		5.77	□□□□□ -1.49
ABCD4-227	ENST00000557554	TEX46	H3BTG2	121 aa		5.76	□□□□□ -1.49
ABCD4-227	ENST00000557554	VCY	O14598	125 aa		5.76	□□□□□ -1.49
ABCD4-227	ENST00000557554	TLX1NB	P0CAT3	122 aa		5.76	□□□□□ -1.49
ABCD4-227	ENST00000557554	SMDT1	Q9H4I9	107 aa		5.76	□□□□□ -1.49
ABCD4-227	ENST00000557554	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554		A8MWL6	223 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	ZNF861P	O60384	105 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	CFC1B	P0CG36	223 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	KRTAP10-6	P60371	365 aa	Predicted RBP	5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	TMEM241	Q24JQ0	296 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	TYMSOS	Q8TAI1	123 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	FAM104A	Q969W3	186 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	BORCS7	Q96B45	105 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	TMEM191A	Q9H0A3	160 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554	PPDPF	Q9H3Y8	114 aa		5.75	□□□□□ -1.49
ABCD4-227	ENST00000557554		A0A1B0GUT8	65 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	HIGD1C	A8MV81	97 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554		F8WDY8	70 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	SUMO2	P61956	95 aa	Known RBP	5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	RPL39	P62891	51 aa	Known RBP	5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	SMAGP	Q0VAQ4	97 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	C9orf129	Q5T035	196 aa	Known RBP	5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	LINC00173	Q6ZV60	143 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	NRAC	Q8N912	160 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	KIR2DL4	Q99706	377 aa		5.74	□□□□□ -1.49
ABCD4-227	ENST00000557554	C2orf82	Q6UX34	121 aa		5.73	□□□□□ -1.49
ABCD4-227	ENST00000557554	FAM231D	Q6ZW35	169 aa		5.73	□□□□□ -1.49
ABCD4-227	ENST00000557554	TIMM21	Q9BVV7	248 aa		5.73	□□□□□ -1.49
ABCD4-227	ENST00000557554	SSPO	A2VEC9	5147 aa		5.72	□□□□□ -1.49
ABCD4-227	ENST00000557554	KIAA0087	Q14695	138 aa		5.72	□□□□□ -1.49
ABCD4-227	ENST00000557554	KRTAP13-2	Q52LG2	175 aa		5.72	□□□□□ -1.49
ABCD4-227	ENST00000557554	ANAPC11	Q9NYG5	84 aa		5.72	□□□□□ -1.49
ABCD4-227	ENST00000557554	SYNE2	Q8WXH0	6885 aa	Known RBP	5.71	□□□□□ -1.49
ABCD4-227	ENST00000557554	IFITM10	A6NMD0	228 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	CEBPG	P53567	150 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	RGS21	Q2M5E4	152 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	CT83	Q5H943	113 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	TMEM18	Q96B42	140 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	CTDSP1	Q9GZU7	261 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	USH2A	O75445	5202 aa		5.71	□□□□□ -1.5
ABCD4-227	ENST00000557554	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.7	□□□□□ -1.5
ABCD4-227	ENST00000557554	NDUFC2-KCTD14	E9PQ53	114 aa		5.7	□□□□□ -1.5
ABCD4-227	ENST00000557554	TAGLN2	P37802	199 aa	Known RBP	5.7	□□□□□ -1.5
ABCD4-227	ENST00000557554	CTAG1A	P78358	180 aa		5.7	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC00469	Q8N7U9	141 aa		5.7	□□□□□ -1.5
ABCD4-227	ENST00000557554	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	TRBV30	A0A0K0K1B3	111 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	PPP1R17	O96001	155 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	HBB	P68871	147 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	KRTAP13-3	Q3SY46	172 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	MRPL51	Q4U2R6	128 aa	Known RBP	5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	C22orf24	Q9Y442	160 aa		5.69	□□□□□ -1.5
ABCD4-227	ENST00000557554	PPP1R2P9	O14990	202 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	NUPR1	O60356	82 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	MRPS36	P82909	103 aa	Known RBP	5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	RIG	Q13278	110 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC00242	Q5T6M2	205 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC00304	Q8N9R0	145 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	PACRG	Q96M98	296 aa	Predicted RBP	5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	XAGE1A	Q9HD64	81 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	SPANXA1	Q9NS26	97 aa		5.68	□□□□□ -1.5
ABCD4-227	ENST00000557554	TMEM250	H0YL14	139 aa		5.67	□□□□□ -1.5
ABCD4-227	ENST00000557554	TCAP	O15273	167 aa		5.67	□□□□□ -1.5
ABCD4-227	ENST00000557554	RPL28	P46779	137 aa	Known RBP	5.67	□□□□□ -1.5
ABCD4-227	ENST00000557554	SEC61B	P60468	96 aa	Known RBP	5.67	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC01551	Q86U37	167 aa		5.67	□□□□□ -1.5
ABCD4-227	ENST00000557554	ZNF727	A8MUV8	499 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	BCE1	O60756	84 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	TNFRSF6B	O95407	300 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	LBH	Q53QV2	105 aa	Predicted RBP	5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	FAM104B	Q5XKR9	115 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC00337	Q8N6G1	96 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	C20orf78	Q9BR46	151 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	SMIM2	Q9BVW6	85 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554		V9GYV3	84 aa		5.66	□□□□□ -1.5
ABCD4-227	ENST00000557554	TRBV24-1	A0A075B6N3	115 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	RPL37AP8	A6NKH3	93 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	CKS2	P33552	79 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	SMIM7	Q9BQ49	75 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	BATF3	Q9NR55	127 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	OSTC	Q9NRP0	149 aa		5.65	□□□□□ -1.5
ABCD4-227	ENST00000557554	LINC00862	A6NCI5	91 aa		5.64	□□□□□ -1.51
ABCD4-227	ENST00000557554	RPL32	P62910	135 aa	Known RBP	5.64	□□□□□ -1.51
ABCD4-227	ENST00000557554	MRPL55	Q7Z7F7	128 aa	Known RBP	5.64	□□□□□ -1.51
ABCD4-227	ENST00000557554	TOMM7	Q9P0U1	55 aa		5.64	□□□□□ -1.51
ABCD4-227	ENST00000557554	IGLV4-3	A0A075B6K6	122 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554		D6R8Y8	96 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	NPY	P01303	97 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	PRSS2	P07478	247 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	IFI27	P40305	119 aa	Predicted RBP	5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	CKS1B	P61024	79 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	ZC2HC1B	Q5TFG8	222 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	FP248	Q71RG6	208 aa	Predicted RBP	5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	SLC51B	Q86UW2	128 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	NAT8B	Q9UHF3	227 aa		5.63	□□□□□ -1.51
ABCD4-227	ENST00000557554	GAGE10	A6NGK3	116 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms