RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 FDCSPQ8NFU4 85 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 CHCHD7Q9BUK0 85 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 UBL5Q9BZL1 73 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 CDKN2A-AS1Q9UH64 79 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 MOB4Q9Y3A3 225 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 CADP27708 2225 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 SDK1Q7Z5N4 2213 aa2.62□□□□□ -1.99
FOXN3-213ENST00000556916 ABCA1O95477 2261 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 TRANK1O15050 2925 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 TRBV7-6A0A0J9YX20 115 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 A0A0U1RRA0 63 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 E7EQL1 145 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 F6UB75 175 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 K7EMT4 169 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 TMEM256-PLSCR3K7ERE1 68 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 RBM3P98179 157 aaKnown RBP2.61□□□□□ -1.99
FOXN3-213ENST00000556916 RNASE13Q5GAN3 156 aaKnown RBP2.61□□□□□ -1.99
FOXN3-213ENST00000556916 ENHOQ6UWT2 76 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 FP248Q71RG6 208 aaPredicted RBP2.61□□□□□ -1.99
FOXN3-213ENST00000556916 WFDC11Q8NEX6 87 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 SMIM11BQ8TCY0 68 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 ZNF625Q96I27 306 aaPredicted RBP2.61□□□□□ -1.99
FOXN3-213ENST00000556916 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
FOXN3-213ENST00000556916 A0A087WZ39 114 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 F8WEM9 126 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 G3V318 75 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 H3BUA1 57 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 NCR3O14931 201 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 LECT2O14960 151 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 DEFB1P60022 68 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 COX6A2Q02221 97 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 IGFL3Q6UXB1 125 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 LINC00337Q8N6G1 96 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 LINC00167Q96N53 147 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 SND1-IT1Q9HBX3 110 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 MED13LQ71F56 2210 aa2.6□□□□□ -1.99
FOXN3-213ENST00000556916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 A0A0U1RQV1 116 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 PLAC8L1A1L4L8 177 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 IGKV2-29A2NJV5 120 aaPredicted RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 LYNX1G3V0Z9 82 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 H3BQ85 93 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 K7EQD1 137 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 ERC2-IT1O76042 136 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 LYNX1P0DP58 116 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 SNRPD3P62318 126 aaKnown RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 C6orf226Q5I0X4 101 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 C9orf129Q5T035 196 aaKnown RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 LINC00242Q5T6M2 205 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 FAM19A1Q7Z5A9 133 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 MIR7-3HGQ8N6C7 128 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 COX7B2Q8TF08 81 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 DYNLRB2Q8TF09 96 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 RMI2Q96E14 147 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 LINC00467Q9BRT7 94 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 C11orf68Q9H3H3 251 aaKnown RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 URB1O60287 2271 aaKnown RBP2.59□□□□□ -1.99
FOXN3-213ENST00000556916 UNC80Q8N2C7 3258 aa2.59□□□□□ -1.99
FOXN3-213ENST00000556916 HTTP42858 3142 aa2.59□□□□□ -2
FOXN3-213ENST00000556916 PLCE1Q9P212 2302 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IGKV3-7A0A075B6H7 116 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IGHV3OR16-12A0A075B7B8 117 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IBA57-AS1B1ANH7 110 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 LY6G6DO95868 133 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IGKV2D-28P01615 120 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 IGHV3-53P01767 116 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 MIFP14174 115 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 PDE6GP18545 87 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 LINC00158P58513 81 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 CXCL6P80162 114 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 PMAIP1Q13794 54 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 UNQ9165/PRO28630Q6UXU0 137 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 PRR15Q8IV56 129 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 C1orf158Q8N1D5 194 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 C5orf56Q8N8D9 126 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 WFDC9Q8NEX5 89 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 SIRPDQ9H106 197 aa2.58□□□□□ -2
FOXN3-213ENST00000556916 TECTAO75443 2155 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 CHD7Q9P2D1 2997 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 LOC110117498A0A087WWA1 95 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 IGHV3-73A0A0B4J1V6 119 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 IGHV3-38A0A0C4DH36 116 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 TRBV6-4A0A1B0GX49 114 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 K7EQG2 157 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 NBL1P41271 181 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 CCL18P55774 89 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 SPINK13Q1W4C9 94 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 DEFB109BQ30KR1 87 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.57□□□□□ -2
FOXN3-213ENST00000556916 Q8N814 137 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 LINC00474Q9P2X8 69 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 SNURFQ9Y675 71 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 COL6A3P12111 3177 aa2.57□□□□□ -2
FOXN3-213ENST00000556916 ABCA4P78363 2273 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 IGHV4-30-2A0A087WSY4 118 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 TRAV10A0A0B4J240 114 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 SAA4P35542 130 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms