RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 PLAC8Q9NZF1 115 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 TNXBP22105 4242 aa5.12□□□□□ -1.59
VTI1B-206ENST00000556461 IGHV3OR16-9A0A0B4J2B5 98 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 IFITM10A6NMD0 228 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 ZNF561-AS1K7EIQ3 104 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 RAB5AP20339 215 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 MALP21145 153 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 SYCNQ0VAF6 134 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 C10orf91Q5T1B1 145 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 CTDSP1Q9GZU7 261 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 LAMTOR2Q9Y2Q5 125 aa5.11□□□□□ -1.59
VTI1B-206ENST00000556461 A0A0J9YXV3 536 aa5.1□□□□□ -1.59
VTI1B-206ENST00000556461 IFI27P40305 119 aaPredicted RBP5.1□□□□□ -1.59
VTI1B-206ENST00000556461 SPAG11BQ08648 103 aa5.1□□□□□ -1.59
VTI1B-206ENST00000556461 STPG4Q8N801 248 aa5.1□□□□□ -1.59
VTI1B-206ENST00000556461 PYGO1Q9Y3Y4 419 aa5.1□□□□□ -1.59
VTI1B-206ENST00000556461 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.59
VTI1B-206ENST00000556461 C4orf48Q5BLP8 95 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 LINC00242Q5T6M2 205 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 C10orf25Q5T742 122 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 C2orf66Q6UXQ4 117 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 LINC00173Q6ZV60 143 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 ORAOV1Q8WV07 137 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 CAMK2N2Q96S95 79 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 CARHSP1Q9Y2V2 147 aaKnown RBP5.09□□□□□ -1.59
VTI1B-206ENST00000556461 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
VTI1B-206ENST00000556461 TRAV9-1A0A075B6T8 112 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.08□□□□□ -1.6
VTI1B-206ENST00000556461 J3QL48 77 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 UBE2D1P51668 147 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 PTTG1IPP53801 180 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 ORMDL2Q53FV1 153 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 TMEM141Q96I45 108 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 C2orf48Q96LS8 159 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 CYSLTR1Q9Y271 337 aa5.08□□□□□ -1.6
VTI1B-206ENST00000556461 LOC107984640A0A0U1RRK4 108 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 A0A1W2PNN7 141 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 APOMO95445 188 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 KIAA0087Q14695 138 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 UNQ6190/PRO20217Q6UXQ8 127 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 TEX43Q6ZNM6 134 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 OR10D4PQ8NGN7 298 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 AMELXQ99217 191 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 ALKBH7Q9BT30 221 aaPredicted RBP5.07□□□□□ -1.6
VTI1B-206ENST00000556461 GNB1LQ9BYB4 327 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 NXT2Q9NPJ8 142 aaKnown RBP5.07□□□□□ -1.6
VTI1B-206ENST00000556461 RPS10P5Q9NQ39 176 aa5.07□□□□□ -1.6
VTI1B-206ENST00000556461 A0A087WZ39 114 aa5.06□□□□□ -1.6
VTI1B-206ENST00000556461 S100PP25815 95 aa5.06□□□□□ -1.6
VTI1B-206ENST00000556461 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
VTI1B-206ENST00000556461 C6orf48Q9UBA6 75 aa5.06□□□□□ -1.6
VTI1B-206ENST00000556461 TGIF2-C20orf24A0A0A6YYL0 155 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 K7EMI3 77 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 OXTP01178 125 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 PRR3P79522 188 aaKnown RBP5.05□□□□□ -1.6
VTI1B-206ENST00000556461 RPL18AQ02543 176 aaKnown RBP5.05□□□□□ -1.6
VTI1B-206ENST00000556461 FABP9Q0Z7S8 132 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 RHEBQ15382 184 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 C7orf33Q8WU49 177 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 C2orf88Q9BSF0 95 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 VCX2Q9H322 139 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 MRPL35Q9NZE8 188 aaKnown RBP5.05□□□□□ -1.6
VTI1B-206ENST00000556461 LINC00474Q9P2X8 69 aa5.05□□□□□ -1.6
VTI1B-206ENST00000556461 LINC01546A6NGU7 62 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 NDUFA1O15239 70 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 APOC3P02656 99 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 NPSP0C0P6 89 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 RNF151Q2KHN1 245 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 C9orf116Q5BN46 136 aaPredicted RBP5.04□□□□□ -1.6
VTI1B-206ENST00000556461 C2orf82Q6UX34 121 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 Q6ZN92 141 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 FAM19A3Q7Z5A8 133 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 TIMM17AQ99595 171 aa5.04□□□□□ -1.6
VTI1B-206ENST00000556461 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 Q6ZRP5 223 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
VTI1B-206ENST00000556461 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 URB1-AS1Q96HZ7 61 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 SCGB3A1Q96QR1 104 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 CDKN2A-AS1Q9UH64 79 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 PKIGQ9Y2B9 76 aa5.03□□□□□ -1.6
VTI1B-206ENST00000556461 A0A096LNJ9 63 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 F8WDY8 70 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 MT-ND6P03923 174 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 TLX1NBP0CAT3 122 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 COX19Q49B96 90 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 ERASQ7Z444 233 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 LINC01561Q8N1V8 128 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 YPEL4Q96NS1 127 aa5.02□□□□□ -1.61
VTI1B-206ENST00000556461 GAGE2EQ4V326 116 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 FA2HQ7L5A8 372 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 KRTAP11-1Q8IUC1 163 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 C18orf32Q8TCD1 76 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 CST9LQ9H4G1 147 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 TOMM7Q9P0U1 55 aa5.01□□□□□ -1.61
VTI1B-206ENST00000556461 GAGE2DQ9UEU5 116 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms