RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 Q8N3U1 123 aa6.23□□□□□ -1.41
ACTN1-218ENST00000556343 IGKV2D-24A0A075B6R9 120 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 COX7A2LO14548 114 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 APOMO95445 188 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 MALP21145 153 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 XCL1P47992 114 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 CFAP161Q6P656 301 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
ACTN1-218ENST00000556343 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
ACTN1-218ENST00000556343 IGLV10-54A0A075B6I4 117 aa6.21□□□□□ -1.42
ACTN1-218ENST00000556343 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
ACTN1-218ENST00000556343 SMIM6P0DI80 62 aa6.21□□□□□ -1.42
ACTN1-218ENST00000556343 Q9HAA7 133 aa6.21□□□□□ -1.42
ACTN1-218ENST00000556343 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
ACTN1-218ENST00000556343 A0A087WZ39 114 aa6.2□□□□□ -1.42
ACTN1-218ENST00000556343 PSCAO43653 123 aa6.2□□□□□ -1.42
ACTN1-218ENST00000556343 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
ACTN1-218ENST00000556343 PYY3Q5JQD4 70 aa6.2□□□□□ -1.42
ACTN1-218ENST00000556343 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
ACTN1-218ENST00000556343 IGHV3OR16-9A0A0B4J2B5 98 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 TMEM223A0PJW6 202 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 PRSS2P07478 247 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 COX6A2Q02221 97 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 C5orf38Q86SI9 138 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 PLEKHB2Q96CS7 222 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
ACTN1-218ENST00000556343 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
ACTN1-218ENST00000556343 M0R2N4 97 aa6.18□□□□□ -1.42
ACTN1-218ENST00000556343 FOXI1Q12951 378 aa6.18□□□□□ -1.42
ACTN1-218ENST00000556343 VPS13DQ5THJ4 4388 aa6.18□□□□□ -1.42
ACTN1-218ENST00000556343 LYSTQ99698 3801 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 E9PLD3 99 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 LEPROTO15243 131 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 LGALS3P17931 250 aaKnown RBP6.17□□□□□ -1.42
ACTN1-218ENST00000556343 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 C6orf223Q8N319 242 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 STPG4Q8N801 248 aa6.17□□□□□ -1.42
ACTN1-218ENST00000556343 ALMS1Q8TCU4 4167 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 IGHV3-64A0A075B6Q5 118 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 hDV102S1A0JD36 115 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 SPINK8P0C7L1 97 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 NMUP48645 174 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 C6orf226Q5I0X4 101 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 C1orf134Q5TEV5 83 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
ACTN1-218ENST00000556343 LCE6AA0A183 80 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 F8WDY8 70 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 ZNF561-AS1K7EIQ3 104 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 CXCL5P42830 114 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 Q6ZR54 194 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 ORAOV1Q8WV07 137 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 C12orf57Q99622 126 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
ACTN1-218ENST00000556343 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 LINC00587B1AMM8 73 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 J3QQQ9 107 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 EREGO14944 169 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 CKS1BP61024 79 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 KRTAP26-1Q6PEX3 210 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 Q8IZM0 81 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 DNAH6Q9C0G6 4158 aa6.14□□□□□ -1.43
ACTN1-218ENST00000556343 SPAG11BQ08648 103 aa6.13□□□□□ -1.43
ACTN1-218ENST00000556343 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
ACTN1-218ENST00000556343 LINC00518Q8N0U6 118 aa6.13□□□□□ -1.43
ACTN1-218ENST00000556343 HERV-K104P63124 156 aa6.12□□□□□ -1.43
ACTN1-218ENST00000556343 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
ACTN1-218ENST00000556343 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
ACTN1-218ENST00000556343 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
ACTN1-218ENST00000556343 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
ACTN1-218ENST00000556343 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 NDUFA1O15239 70 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 COX8AP10176 69 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 SLC25A34Q6PIV7 304 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 NDUFA12Q9UI09 145 aa6.11□□□□□ -1.43
ACTN1-218ENST00000556343 KMT2AQ03164 3969 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 GVQW2A0A096LPI5 108 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-218ENST00000556343 DLEU1O43261 78 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 GCSHP23434 173 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 C14orf144Q96I85 54 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 CAMK2N2Q96S95 79 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 UQCR10Q9UDW1 63 aa6.1□□□□□ -1.43
ACTN1-218ENST00000556343 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.09□□□□□ -1.43
ACTN1-218ENST00000556343 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 HIGD2BQ4VC39 106 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 CDPF1Q6NVV7 123 aa6.09□□□□□ -1.43
ACTN1-218ENST00000556343 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 237.9 ms