RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 FNDC10F2Z333 226 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 M0R381 172 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 SCO1O75880 301 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 SEC11BP0C7V7 166 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 S100A4P26447 101 aaKnown RBP2.07□□□□□ -2.08
ATXN3-234ENST00000555958 UBE2L3P68036 154 aaKnown RBP2.07□□□□□ -2.08
ATXN3-234ENST00000555958 COTL1Q14019 142 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 PMVKQ15126 192 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 PRNTQ86SH4 94 aa2.07□□□□□ -2.08
ATXN3-234ENST00000555958 CARHSP1Q9Y2V2 147 aaKnown RBP2.07□□□□□ -2.08
ATXN3-234ENST00000555958 IGLV7-43P04211 117 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 ARMS2P0C7Q2 107 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 BCL2P10415 239 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 UBE2D1P51668 147 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 S100A10P60903 97 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 SSBP1Q04837 148 aaKnown RBP2.06□□□□□ -2.08
ATXN3-234ENST00000555958 SPCS2Q15005 226 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 ZNF56Q15929 161 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 CMTM2Q8TAZ6 248 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 DYNC2LI1Q8TCX1 351 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 CHCHD7Q9BUK0 85 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 DERL1Q9BUN8 251 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 GGACTQ9BVM4 153 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 ZNF471Q9BX82 626 aaPredicted RBP2.06□□□□□ -2.08
ATXN3-234ENST00000555958 NPCDR1Q9BY65 106 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 VCX3BQ9H321 246 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 C11orf1Q9H5F2 150 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 LENEPQ9Y5L5 61 aa2.06□□□□□ -2.08
ATXN3-234ENST00000555958 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
ATXN3-234ENST00000555958 B4DEV8 164 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 NDUFS5O43920 106 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 CRIP1P50238 77 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 DEFA1P59665 94 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 CTAG1AP78358 180 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 C9orf116Q5BN46 136 aaPredicted RBP2.05□□□□□ -2.08
ATXN3-234ENST00000555958 DIRC1Q969H9 104 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 PTH2Q96A98 100 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 SFRP2Q96HF1 295 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 SH3BGRL3Q9H299 93 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 C8orf17Q9NRJ1 99 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 PHLDA3Q9Y5J5 127 aa2.05□□□□□ -2.08
ATXN3-234ENST00000555958 TRBV6-1A0A0K0K1D8 114 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 SULT1A1P50225 295 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 SULT1A2P50226 295 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 TAS2R30P59541 319 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 RAB2AP61019 212 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 EIF5AP63241 154 aaKnown RBP2.04□□□□□ -2.08
ATXN3-234ENST00000555958 MRPS10P82664 201 aaKnown RBP2.04□□□□□ -2.08
ATXN3-234ENST00000555958 PYDC2Q56P42 97 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 RNASE13Q5GAN3 156 aaKnown RBP2.04□□□□□ -2.08
ATXN3-234ENST00000555958 TOMM5Q8N4H5 51 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 FER1L6-AS1Q8NA97 138 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 OR5C1Q8NGR4 320 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 AP3S1Q92572 193 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 MARVELD1Q9BSK0 173 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 OTORQ9NRC9 128 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 OR5AC2Q9NZP5 309 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 PRO0628Q9UI54 55 aa2.04□□□□□ -2.08
ATXN3-234ENST00000555958 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
ATXN3-234ENST00000555958 TRBV25-1A0A075B6N4 114 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-234ENST00000555958 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 IGHV1-24A0A0C4DH33 117 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 TRBV10-1A0A0K0K1A3 114 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 SH2D1AO60880 128 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 SIX6O95475 246 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 TCRAP04437 139 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 CRYGAP11844 174 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 S100A11P31949 105 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 XCL1P47992 114 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 MT1HP80294 61 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 FLI1Q01543 452 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-234ENST00000555958 FAM19A5Q7Z5A7 132 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-234ENST00000555958 OR10AG1Q8NH19 301 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 CARD19Q96LW7 228 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 AQP10Q96PS8 301 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 SEC22CQ9BRL7 303 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 SMIM3Q9BZL3 60 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 LYRM2Q9NU23 88 aaPredicted RBP2.03□□□□□ -2.08
ATXN3-234ENST00000555958 IL36BQ9NZH7 164 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 CBY1Q9Y3M2 126 aa2.03□□□□□ -2.08
ATXN3-234ENST00000555958 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 A0A087WXM4 84 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 A8MWL6 223 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 ATP6V1G2O95670 118 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 ARL14EPLP0DKL9 152 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 RPL12P30050 165 aaKnown RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 FAUP35544 74 aaKnown RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 NKX2-5P52952 324 aaPredicted RBP2.02□□□□□ -2.09
ATXN3-234ENST00000555958 RAB4BP61018 213 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 IQCJQ1A5X6 159 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 KRTAP19-2Q3LHN2 52 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 KHDC3LQ587J8 217 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 STX12Q86Y82 276 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 ORMDL3Q8N138 153 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 ORAOV1Q8WV07 137 aa2.02□□□□□ -2.09
ATXN3-234ENST00000555958 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms