RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
FOXN3-205ENST00000553904 Q6ZN92 141 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 Q6ZUT4 128 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 C2orf88Q9BSF0 95 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
FOXN3-205ENST00000553904 MRPL35Q9NZE8 188 aaKnown RBP4.09□□□□□ -1.75
FOXN3-205ENST00000553904 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.76
FOXN3-205ENST00000553904 IGHV3OR16-9A0A0B4J2B5 98 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 NPYP01303 97 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
FOXN3-205ENST00000553904 NPSP0C0P6 89 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
FOXN3-205ENST00000553904 SEC11AP67812 179 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 PRR3P79522 188 aaKnown RBP4.08□□□□□ -1.76
FOXN3-205ENST00000553904 RPL18AQ02543 176 aaKnown RBP4.08□□□□□ -1.76
FOXN3-205ENST00000553904 ORMDL2Q53FV1 153 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 PAPPA-AS1Q5QFB9 102 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 TEX43Q6ZNM6 134 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 ORAOV1Q8WV07 137 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 TMEM141Q96I45 108 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 LINC01600Q96MT4 127 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 VCX2Q9H322 139 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 CYSLTR1Q9Y271 337 aa4.08□□□□□ -1.76
FOXN3-205ENST00000553904 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
FOXN3-205ENST00000553904 LOC389332A0A1B0GUA5 103 aa4.07□□□□□ -1.76
FOXN3-205ENST00000553904 LINC01549A6NIU2 74 aa4.07□□□□□ -1.76
FOXN3-205ENST00000553904 MT-ND6P03923 174 aa4.07□□□□□ -1.76
FOXN3-205ENST00000553904 LINC01561Q8N1V8 128 aa4.07□□□□□ -1.76
FOXN3-205ENST00000553904 PACRGQ96M98 296 aaPredicted RBP4.07□□□□□ -1.76
FOXN3-205ENST00000553904 OPRPNQ99935 248 aaPredicted RBP4.07□□□□□ -1.76
FOXN3-205ENST00000553904 CTDSP1Q9GZU7 261 aa4.07□□□□□ -1.76
FOXN3-205ENST00000553904 NXT2Q9NPJ8 142 aaKnown RBP4.07□□□□□ -1.76
FOXN3-205ENST00000553904 A0A087WZ39 114 aa4.06□□□□□ -1.76
FOXN3-205ENST00000553904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.06□□□□□ -1.76
FOXN3-205ENST00000553904 PRSS2P07478 247 aa4.06□□□□□ -1.76
FOXN3-205ENST00000553904 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
FOXN3-205ENST00000553904 SRSF9Q13242 221 aaKnown RBP eCLIP4.06□□□□□ -1.76
FOXN3-205ENST00000553904 C9orf116Q5BN46 136 aaPredicted RBP4.06□□□□□ -1.76
FOXN3-205ENST00000553904 C6orf226Q5I0X4 101 aa4.06□□□□□ -1.76
FOXN3-205ENST00000553904 Q8N8P6 123 aa4.06□□□□□ -1.76
FOXN3-205ENST00000553904 IGLV4-3A0A075B6K6 122 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 A0A0J9YXV3 536 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 TRBV30A0A0K0K1B3 111 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 A0A1W2PNN7 141 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 S100PP25815 95 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 CKS1BP61024 79 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 UQCC3Q6UW78 93 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 C2orf66Q6UXQ4 117 aa4.05□□□□□ -1.76
FOXN3-205ENST00000553904 TRAV9-1A0A075B6T8 112 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 UBE2D1P51668 147 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 HERVK_113P63121 156 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 COX19Q49B96 90 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 C1orf137Q5JT78 98 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 CLLU1Q5K131 121 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 LINC00242Q5T6M2 205 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 UNQ6190/PRO20217Q6UXQ8 127 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 DIRC1Q969H9 104 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 GEMIN7Q9H840 131 aaKnown RBP4.04□□□□□ -1.76
FOXN3-205ENST00000553904 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
FOXN3-205ENST00000553904 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
FOXN3-205ENST00000553904 NDUFC2-KCTD14E9PQ53 114 aa4.03□□□□□ -1.76
FOXN3-205ENST00000553904 ERASQ7Z444 233 aa4.03□□□□□ -1.76
FOXN3-205ENST00000553904 AMELXQ99217 191 aa4.03□□□□□ -1.76
FOXN3-205ENST00000553904 ALKBH7Q9BT30 221 aaPredicted RBP4.03□□□□□ -1.76
FOXN3-205ENST00000553904 PSORS1C2Q9UIG4 136 aa4.03□□□□□ -1.76
FOXN3-205ENST00000553904 IGIPA6NJ69 53 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 CXCL5P42830 114 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 UBE2BP63146 152 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 KIAA0087Q14695 138 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 LBHQ53QV2 105 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-205ENST00000553904 C10orf25Q5T742 122 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 PHF5AQ7RTV0 110 aaKnown RBP4.02□□□□□ -1.77
FOXN3-205ENST00000553904 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 TOMM6Q96B49 74 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 SCGB3A1Q96QR1 104 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 TIMM17AQ99595 171 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 SEC11CQ9BY50 192 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 GNB1LQ9BYB4 327 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 TOMM7Q9P0U1 55 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 C6orf48Q9UBA6 75 aa4.02□□□□□ -1.77
FOXN3-205ENST00000553904 TMEM218A2RU14 115 aa4.01□□□□□ -1.77
FOXN3-205ENST00000553904 IGLV7-43P04211 117 aa4.01□□□□□ -1.77
FOXN3-205ENST00000553904 ODF1Q14990 250 aa4.01□□□□□ -1.77
FOXN3-205ENST00000553904 Q8IZM0 81 aa4.01□□□□□ -1.77
FOXN3-205ENST00000553904 SMCO4Q9NRQ5 59 aa4.01□□□□□ -1.77
FOXN3-205ENST00000553904 F8VRH5 84 aa4□□□□□ -1.77
FOXN3-205ENST00000553904 M0QXV9 152 aa4□□□□□ -1.77
FOXN3-205ENST00000553904 C2orf82Q6UX34 121 aa4□□□□□ -1.77
FOXN3-205ENST00000553904 FAM19A5Q7Z5A7 132 aaPredicted RBP4□□□□□ -1.77
FOXN3-205ENST00000553904 MRPL18Q9H0U6 180 aaKnown RBP4□□□□□ -1.77
FOXN3-205ENST00000553904 FAT1Q14517 4588 aa4□□□□□ -1.77
FOXN3-205ENST00000553904 IGLV1-50A0A075B6I6 118 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 TINCRA0A1B0GVN0 87 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 H3BRM9 83 aa3.99□□□□□ -1.77
FOXN3-205ENST00000553904 NUPR1O60356 82 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms