RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 NDUFA5Q16718 116 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 STPG4Q8N801 248 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 FAT3Q8TDW7 4589 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
CDK4-215ENST00000553237 PKHD1L1Q86WI1 4243 aa10.03□□□□□ -0.8
CDK4-215ENST00000553237 MALP21145 153 aa10.02□□□□□ -0.81
CDK4-215ENST00000553237 SVBPQ8N300 66 aa10.02□□□□□ -0.81
CDK4-215ENST00000553237 COX7A2LO14548 114 aa10.01□□□□□ -0.81
CDK4-215ENST00000553237 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
CDK4-215ENST00000553237 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
CDK4-215ENST00000553237 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
CDK4-215ENST00000553237 COX19Q49B96 90 aa10.01□□□□□ -0.81
CDK4-215ENST00000553237 C5orf38Q86SI9 138 aa10.01□□□□□ -0.81
CDK4-215ENST00000553237 C7orf33Q8WU49 177 aa10.01□□□□□ -0.81
CDK4-215ENST00000553237 NXT2Q9NPJ8 142 aaKnown RBP10.01□□□□□ -0.81
CDK4-215ENST00000553237 SNAPINO95295 136 aa10□□□□□ -0.81
CDK4-215ENST00000553237 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
CDK4-215ENST00000553237 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
CDK4-215ENST00000553237 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
CDK4-215ENST00000553237 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
CDK4-215ENST00000553237 PYGO1Q9Y3Y4 419 aa9.99□□□□□ -0.81
CDK4-215ENST00000553237 K7EMI3 77 aa9.98□□□□□ -0.81
CDK4-215ENST00000553237 MT-ND6P03923 174 aa9.98□□□□□ -0.81
CDK4-215ENST00000553237 FABP9Q0Z7S8 132 aa9.98□□□□□ -0.81
CDK4-215ENST00000553237 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
CDK4-215ENST00000553237 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
CDK4-215ENST00000553237 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
CDK4-215ENST00000553237 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
CDK4-215ENST00000553237 IFITM10A6NMD0 228 aa9.97□□□□□ -0.81
CDK4-215ENST00000553237 Q6ZRU5 148 aa9.97□□□□□ -0.81
CDK4-215ENST00000553237 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
CDK4-215ENST00000553237 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
CDK4-215ENST00000553237 GAGE2BQ13066 116 aa9.96□□□□□ -0.82
CDK4-215ENST00000553237 SERTAD4-AS1Q5TG53 156 aa9.96□□□□□ -0.82
CDK4-215ENST00000553237 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
CDK4-215ENST00000553237 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
CDK4-215ENST00000553237 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
CDK4-215ENST00000553237 APOMO95445 188 aa9.94□□□□□ -0.82
CDK4-215ENST00000553237 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
CDK4-215ENST00000553237 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
CDK4-215ENST00000553237 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
CDK4-215ENST00000553237 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 IGIPA6NJ69 53 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 MT1HL1P0DM35 61 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 G0S2P27469 103 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
CDK4-215ENST00000553237 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 Q6ZN92 141 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 TEX43Q6ZNM6 134 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 SLC7A5P1Q8MH63 180 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
CDK4-215ENST00000553237 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
CDK4-215ENST00000553237 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
CDK4-215ENST00000553237 VCX2Q9H322 139 aa9.92□□□□□ -0.82
CDK4-215ENST00000553237 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
CDK4-215ENST00000553237 NPSP0C0P6 89 aa9.91□□□□□ -0.82
CDK4-215ENST00000553237 LINC00242Q5T6M2 205 aa9.91□□□□□ -0.82
CDK4-215ENST00000553237 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
CDK4-215ENST00000553237 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
CDK4-215ENST00000553237 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
CDK4-215ENST00000553237 UBE2D1P51668 147 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
CDK4-215ENST00000553237 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 FA2HQ7L5A8 372 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 YPEL4Q96NS1 127 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 AMELXQ99217 191 aa9.9□□□□□ -0.82
CDK4-215ENST00000553237 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
CDK4-215ENST00000553237 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
CDK4-215ENST00000553237 TIMM17AQ99595 171 aa9.89□□□□□ -0.83
CDK4-215ENST00000553237 SMCO4Q9NRQ5 59 aa9.89□□□□□ -0.83
CDK4-215ENST00000553237 PAPPA-AS1Q5QFB9 102 aa9.88□□□□□ -0.83
CDK4-215ENST00000553237 ERASQ7Z444 233 aa9.88□□□□□ -0.83
CDK4-215ENST00000553237 CBLN2Q8IUK8 224 aa9.88□□□□□ -0.83
CDK4-215ENST00000553237 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
CDK4-215ENST00000553237 A0A087WZ39 114 aa9.87□□□□□ -0.83
CDK4-215ENST00000553237 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
CDK4-215ENST00000553237 C10orf25Q5T742 122 aa9.87□□□□□ -0.83
CDK4-215ENST00000553237 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
CDK4-215ENST00000553237 RNF151Q2KHN1 245 aa9.86□□□□□ -0.83
CDK4-215ENST00000553237 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
CDK4-215ENST00000553237 Q6ZRP5 223 aa9.86□□□□□ -0.83
CDK4-215ENST00000553237 MRPL35Q9NZE8 188 aaKnown RBP9.86□□□□□ -0.83
CDK4-215ENST00000553237 HMCN2Q8NDA2 5059 aa9.86□□□□□ -0.83
CDK4-215ENST00000553237 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
CDK4-215ENST00000553237 NDUFA1O15239 70 aa9.85□□□□□ -0.83
CDK4-215ENST00000553237 LINC00614P0C842 121 aa9.84□□□□□ -0.83
CDK4-215ENST00000553237 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
CDK4-215ENST00000553237 URB1-AS1Q96HZ7 61 aa9.84□□□□□ -0.83
CDK4-215ENST00000553237 F8WDY8 70 aa9.83□□□□□ -0.84
CDK4-215ENST00000553237 SPINK6Q6UWN8 80 aa9.83□□□□□ -0.84
CDK4-215ENST00000553237 PHF5AQ7RTV0 110 aaKnown RBP9.83□□□□□ -0.84
CDK4-215ENST00000553237 C6orf48Q9UBA6 75 aa9.83□□□□□ -0.84
CDK4-215ENST00000553237 HERVK_113P63121 156 aa9.82□□□□□ -0.84
CDK4-215ENST00000553237 SEC11AP67812 179 aa9.82□□□□□ -0.84
CDK4-215ENST00000553237 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDK4-215ENST00000553237 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms