RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
TMEM116-218ENST00000552839 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
TMEM116-218ENST00000552839 PRR34Q9NV39 138 aa7.59□□□□□ -1.19
TMEM116-218ENST00000552839 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
TMEM116-218ENST00000552839 VPS13BQ7Z7G8 4022 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 H0Y8G0 127 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 CCL25O15444 150 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 PRSS1P07477 247 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 MALP21145 153 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 KRTAP10-1P60331 282 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
TMEM116-218ENST00000552839 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
TMEM116-218ENST00000552839 LINC00959A0A1B0GUT2 108 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 GAGE12HA6NDE8 117 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 IGIPA6NJ69 53 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 FABP4P15090 132 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 S100A2P29034 98 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 SEC11AP67812 179 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 GEMIN7Q9H840 131 aaKnown RBP7.57□□□□□ -1.2
TMEM116-218ENST00000552839 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 FAT1Q14517 4588 aa7.57□□□□□ -1.2
TMEM116-218ENST00000552839 PMVKQ15126 192 aa7.56□□□□□ -1.2
TMEM116-218ENST00000552839 PDZD11Q5EBL8 140 aa7.56□□□□□ -1.2
TMEM116-218ENST00000552839 IFI27L1Q96BM0 104 aa7.56□□□□□ -1.2
TMEM116-218ENST00000552839 J3QL48 77 aa7.55□□□□□ -1.2
TMEM116-218ENST00000552839 C14orf177Q52M58 125 aa7.55□□□□□ -1.2
TMEM116-218ENST00000552839 BAALCQ8WXS3 180 aa7.55□□□□□ -1.2
TMEM116-218ENST00000552839 A0A096LNJ9 63 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 COX7A2LO14548 114 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 APOMO95445 188 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 HAMPP81172 84 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 PACRGQ96M98 296 aaPredicted RBP7.54□□□□□ -1.2
TMEM116-218ENST00000552839 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
TMEM116-218ENST00000552839 A0A087WTM6 91 aa7.53□□□□□ -1.2
TMEM116-218ENST00000552839 LECT2O14960 151 aa7.53□□□□□ -1.2
TMEM116-218ENST00000552839 LINC00310P59036 64 aa7.53□□□□□ -1.2
TMEM116-218ENST00000552839 HERVK_113P63121 156 aa7.53□□□□□ -1.2
TMEM116-218ENST00000552839 AMELXQ99217 191 aa7.53□□□□□ -1.2
TMEM116-218ENST00000552839 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
TMEM116-218ENST00000552839 H3BRM9 83 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 NUPR1O60356 82 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 UBE2D1P51668 147 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 COA6Q5JTJ3 125 aaKnown RBP7.52□□□□□ -1.21
TMEM116-218ENST00000552839 C5orf38Q86SI9 138 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 LINC00469Q8N7U9 141 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
TMEM116-218ENST00000552839 CHTOPQ9Y3Y2 248 aaKnown RBP7.52□□□□□ -1.21
TMEM116-218ENST00000552839 A0A0J9YXV3 536 aa7.51□□□□□ -1.21
TMEM116-218ENST00000552839 USP17L23D6RBM5 183 aa7.51□□□□□ -1.21
TMEM116-218ENST00000552839 GCSHP23434 173 aa7.51□□□□□ -1.21
TMEM116-218ENST00000552839 LINC00173Q6ZV60 143 aa7.51□□□□□ -1.21
TMEM116-218ENST00000552839 IGHV1-58A0A0C4DH39 117 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 hDV102S1A0JD36 115 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 C20orf202A1L168 122 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 KRTDAPP60985 99 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 FOXI1Q12951 378 aa7.5□□□□□ -1.21
TMEM116-218ENST00000552839 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.49□□□□□ -1.21
TMEM116-218ENST00000552839 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 PRSS2P07478 247 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 HIGD2BQ4VC39 106 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
TMEM116-218ENST00000552839 KRTAP29-1A8MX34 341 aaPredicted RBP7.48□□□□□ -1.21
TMEM116-218ENST00000552839 F8VRH5 84 aa7.48□□□□□ -1.21
TMEM116-218ENST00000552839 SNRPEP62304 92 aaKnown RBP7.48□□□□□ -1.21
TMEM116-218ENST00000552839 ORAOV1Q8WV07 137 aa7.48□□□□□ -1.21
TMEM116-218ENST00000552839 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
TMEM116-218ENST00000552839 IGLC3P0DOY3 106 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 PLNP26678 52 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 HIST3H2BBQ8N257 126 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 Q8N814 137 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
TMEM116-218ENST00000552839 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
TMEM116-218ENST00000552839 A0A087WZ39 114 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.46□□□□□ -1.22
TMEM116-218ENST00000552839 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 DPM2O94777 84 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 HERVK_113P61574 105 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 COX6A2Q02221 97 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 FAM19A3Q7Z5A8 133 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 OR10D4PQ8NGN7 298 aa7.46□□□□□ -1.22
TMEM116-218ENST00000552839 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 LRCOL1A6NCL2 159 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 C11orf86A6NJI1 115 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 SPINK8P0C7L1 97 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 WFDC2Q14508 124 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 ODF1Q14990 250 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
TMEM116-218ENST00000552839 NTN5Q8WTR8 489 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms