RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 TMEM105Q8N8V8 129 aa3.59□□□□□ -1.84
APAF1-209ENST00000550527 LITAFQ99732 161 aa3.59□□□□□ -1.84
APAF1-209ENST00000550527 LY6LH3BQJ8 138 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 H3BS24 57 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 LY6HO94772 140 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 MSMPQ1L6U9 139 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 IGHV4-30-2A0A087WSY4 118 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 IGLV5-39A0A0G2JS06 123 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 ODF3BA8MYP8 253 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 IGHV4-59P01825 116 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 SMIM29Q86T20 159 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 PTPRZ1P23471 2315 aaPredicted RBP3.58□□□□□ -1.84
APAF1-209ENST00000550527 ASXL3Q9C0F0 2248 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 H0Y9P7 68 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 SPAG11AQ6PDA7 123 aa3.58□□□□□ -1.84
APAF1-209ENST00000550527 RANBP2P49792 3224 aaKnown RBP3.58□□□□□ -1.84
APAF1-209ENST00000550527 A0A0J9YWU9 116 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 TRAV22A0A0B4J277 110 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 DNAJC9-AS1A6NH13 148 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 ZNF407Q9C0G0 2248 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 HTTP42858 3142 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 M0R378 163 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 Q6ZTI0 123 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 K7EQG2 157 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
APAF1-209ENST00000550527 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 SPATA3Q8NHX4 192 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 BPESC1Q9GZL8 116 aa3.57□□□□□ -1.84
APAF1-209ENST00000550527 Q1T7F1 81 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 C2orf16Q68DN1 1984 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 TPRP12270 2363 aaKnown RBP3.56□□□□□ -1.84
APAF1-209ENST00000550527 Q9UF83 564 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 CELSR3Q9NYQ7 3312 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 B4DSR2 109 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 H3BPC8 53 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 ADAMTS20P59510 1910 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 DSCR9P59020 149 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 FAM215AQ9Y5M1 114 aa3.56□□□□□ -1.84
APAF1-209ENST00000550527 IGLV5-45A0A087WSX0 123 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 REG3AQ06141 175 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 C6orf223Q8N319 242 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 C9orf116Q5BN46 136 aaPredicted RBP3.55□□□□□ -1.84
APAF1-209ENST00000550527 PTPRBP23467 1997 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 WDR87Q6ZQQ6 2873 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 POLEQ07864 2286 aa3.55□□□□□ -1.84
APAF1-209ENST00000550527 RP1L1Q8IWN7 2480 aaPredicted RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 SPTBN5Q9NRC6 3674 aaKnown RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 MAP1BP46821 2468 aaKnown RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 ZNF318Q5VUA4 2279 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 IGKV2D-24A0A075B6R9 120 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 A0A1B0GW54 56 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 MRGPRG-AS1Q2M3A8 158 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 Q6ZRU5 148 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 ARFGEF3Q5TH69 2177 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 SLURP1P55000 103 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 LINC00315P59091 139 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 TET2Q6N021 2002 aaPredicted RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 ELOF1P60002 83 aaKnown RBP3.54□□□□□ -1.84
APAF1-209ENST00000550527 C1orf137Q5JT78 98 aa3.54□□□□□ -1.84
APAF1-209ENST00000550527 F8W735 103 aaPredicted RBP3.53□□□□□ -1.84
APAF1-209ENST00000550527 OXTP01178 125 aa3.53□□□□□ -1.84
APAF1-209ENST00000550527 MSMBP08118 114 aa3.53□□□□□ -1.84
APAF1-209ENST00000550527 PRR3P79522 188 aaKnown RBP3.53□□□□□ -1.84
APAF1-209ENST00000550527 MUC22E2RYF6 1773 aaPredicted RBP3.53□□□□□ -1.84
APAF1-209ENST00000550527 BPTFQ12830 3046 aa3.53□□□□□ -1.84
APAF1-209ENST00000550527 C11orf72Q8NBR9 251 aa3.53□□□□□ -1.84
APAF1-209ENST00000550527 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
APAF1-209ENST00000550527 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.85
APAF1-209ENST00000550527 XAGE1AQ9HD64 81 aa3.53□□□□□ -1.85
APAF1-209ENST00000550527 PRO0255Q9UI72 69 aa3.53□□□□□ -1.85
APAF1-209ENST00000550527 PRRC2AP48634 2157 aaKnown RBP3.52□□□□□ -1.85
APAF1-209ENST00000550527 CACNA1EQ15878 2313 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 PCNX2A6NKB5 2137 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 ICE1Q9Y2F5 2266 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 EIF4EBP3O60516 100 aaPredicted RBP3.52□□□□□ -1.85
APAF1-209ENST00000550527 GRNP28799 593 aaKnown RBP3.52□□□□□ -1.85
APAF1-209ENST00000550527 IGFL3Q6UXB1 125 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 LINC01356Q8N9X3 169 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 LYPD5Q6UWN5 251 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 DOCK10Q96BY6 2186 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 RNF223E7ERA6 249 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 SYCNQ0VAF6 134 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 BBC3Q96PG8 261 aaPredicted RBP3.52□□□□□ -1.85
APAF1-209ENST00000550527 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 KLK12Q9UKR0 248 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
APAF1-209ENST00000550527 FREM1Q5H8C1 2179 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 LRP4O75096 1905 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 PSCAO43653 123 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 DSCAMO60469 2012 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 ARHGAP32A7KAX9 2087 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 SPTBN2O15020 2390 aa3.51□□□□□ -1.85
APAF1-209ENST00000550527 ZDBF2Q9HCK1 2354 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms