RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 K7EMI3 77 aa12.51□□□□□ -0.41
GCN1-207ENST00000550471 RPL39P62891 51 aaKnown RBP12.51□□□□□ -0.41
GCN1-207ENST00000550471 RNASE13Q5GAN3 156 aaKnown RBP12.51□□□□□ -0.41
GCN1-207ENST00000550471 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
GCN1-207ENST00000550471 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
GCN1-207ENST00000550471 Q6ZRP5 223 aa12.5□□□□□ -0.41
GCN1-207ENST00000550471 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
GCN1-207ENST00000550471 IFITM10A6NMD0 228 aa12.49□□□□□ -0.41
GCN1-207ENST00000550471 IMMP2LQ96T52 175 aa12.49□□□□□ -0.41
GCN1-207ENST00000550471 MAP1LC3AQ9H492 121 aa12.49□□□□□ -0.41
GCN1-207ENST00000550471 PKHD1L1Q86WI1 4243 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 LRP1Q07954 4544 aaKnown RBP12.48□□□□□ -0.41
GCN1-207ENST00000550471 IGHV3OR16-9A0A0B4J2B5 98 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 NPSP0C0P6 89 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 G0S2P27469 103 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 SPINK6Q6UWN8 80 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
GCN1-207ENST00000550471 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
GCN1-207ENST00000550471 NDUFA1O15239 70 aa12.47□□□□□ -0.41
GCN1-207ENST00000550471 FAT3Q8TDW7 4589 aa12.46□□□□□ -0.41
GCN1-207ENST00000550471 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
GCN1-207ENST00000550471 ORAOV1Q8WV07 137 aa12.46□□□□□ -0.41
GCN1-207ENST00000550471 TMEM141Q96I45 108 aa12.46□□□□□ -0.41
GCN1-207ENST00000550471 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
GCN1-207ENST00000550471 Q6ZN92 141 aa12.45□□□□□ -0.42
GCN1-207ENST00000550471 LINC01561Q8N1V8 128 aa12.45□□□□□ -0.42
GCN1-207ENST00000550471 C2orf88Q9BSF0 95 aa12.45□□□□□ -0.42
GCN1-207ENST00000550471 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.44□□□□□ -0.42
GCN1-207ENST00000550471 Q8N8P6 123 aa12.44□□□□□ -0.42
GCN1-207ENST00000550471 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
GCN1-207ENST00000550471 CYSLTR1Q9Y271 337 aa12.44□□□□□ -0.42
GCN1-207ENST00000550471 A0A087WZ39 114 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 MT1HL1P0DM35 61 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 RPL18AQ02543 176 aaKnown RBP12.43□□□□□ -0.42
GCN1-207ENST00000550471 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 PAPPA-AS1Q5QFB9 102 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 TEX43Q6ZNM6 134 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 LINC01600Q96MT4 127 aa12.43□□□□□ -0.42
GCN1-207ENST00000550471 TLX1NBP0CAT3 122 aa12.42□□□□□ -0.42
GCN1-207ENST00000550471 UQCC3Q6UW78 93 aa12.42□□□□□ -0.42
GCN1-207ENST00000550471 NXT2Q9NPJ8 142 aaKnown RBP12.42□□□□□ -0.42
GCN1-207ENST00000550471 IGLV4-3A0A075B6K6 122 aa12.41□□□□□ -0.42
GCN1-207ENST00000550471 TRAV9-1A0A075B6T8 112 aa12.41□□□□□ -0.42
GCN1-207ENST00000550471 OPRPNQ99935 248 aaPredicted RBP12.41□□□□□ -0.42
GCN1-207ENST00000550471 C9orf116Q5BN46 136 aaPredicted RBP12.4□□□□□ -0.42
GCN1-207ENST00000550471 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
GCN1-207ENST00000550471 LOC389332A0A1B0GUA5 103 aa12.39□□□□□ -0.43
GCN1-207ENST00000550471 SEC11AP67812 179 aa12.39□□□□□ -0.43
GCN1-207ENST00000550471 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
GCN1-207ENST00000550471 C2orf66Q6UXQ4 117 aa12.39□□□□□ -0.43
GCN1-207ENST00000550471 VCX2Q9H322 139 aa12.39□□□□□ -0.43
GCN1-207ENST00000550471 TRBV30A0A0K0K1B3 111 aa12.38□□□□□ -0.43
GCN1-207ENST00000550471 LINC01549A6NIU2 74 aa12.38□□□□□ -0.43
GCN1-207ENST00000550471 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
GCN1-207ENST00000550471 A0A1W2PNN7 141 aa12.36□□□□□ -0.43
GCN1-207ENST00000550471 MT-ND6P03923 174 aa12.36□□□□□ -0.43
GCN1-207ENST00000550471 UBE2D1P51668 147 aa12.36□□□□□ -0.43
GCN1-207ENST00000550471 AMELXQ99217 191 aa12.36□□□□□ -0.43
GCN1-207ENST00000550471 A0A0J9YXV3 536 aa12.35□□□□□ -0.43
GCN1-207ENST00000550471 PACRGQ96M98 296 aaPredicted RBP12.35□□□□□ -0.43
GCN1-207ENST00000550471 COX19Q49B96 90 aa12.34□□□□□ -0.43
GCN1-207ENST00000550471 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
GCN1-207ENST00000550471 PRSS2P07478 247 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 S100PP25815 95 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 KIAA0087Q14695 138 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 TIMM17AQ99595 171 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 C6orf48Q9UBA6 75 aa12.33□□□□□ -0.44
GCN1-207ENST00000550471 TMEM218A2RU14 115 aa12.32□□□□□ -0.44
GCN1-207ENST00000550471 IGIPA6NJ69 53 aa12.32□□□□□ -0.44
GCN1-207ENST00000550471 HERVK_113P63121 156 aa12.32□□□□□ -0.44
GCN1-207ENST00000550471 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
GCN1-207ENST00000550471 PSORS1C2Q9UIG4 136 aa12.31□□□□□ -0.44
GCN1-207ENST00000550471 NDUFC2-KCTD14E9PQ53 114 aa12.3□□□□□ -0.44
GCN1-207ENST00000550471 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
GCN1-207ENST00000550471 HMCN2Q8NDA2 5059 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 CKS1BP61024 79 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 ODF1Q14990 250 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 Q8IZM0 81 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 TOMM6Q96B49 74 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 GNB1LQ9BYB4 327 aa12.29□□□□□ -0.44
GCN1-207ENST00000550471 C6orf226Q5I0X4 101 aa12.28□□□□□ -0.44
GCN1-207ENST00000550471 C1orf137Q5JT78 98 aa12.28□□□□□ -0.44
GCN1-207ENST00000550471 LINC00173Q6ZV60 143 aa12.28□□□□□ -0.44
GCN1-207ENST00000550471 PHF5AQ7RTV0 110 aaKnown RBP12.28□□□□□ -0.44
GCN1-207ENST00000550471 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
GCN1-207ENST00000550471 KRTAP10-8P60410 259 aa12.27□□□□□ -0.45
GCN1-207ENST00000550471 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
GCN1-207ENST00000550471 ERASQ7Z444 233 aa12.27□□□□□ -0.45
GCN1-207ENST00000550471 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.45
GCN1-207ENST00000550471 CXCL5P42830 114 aa12.26□□□□□ -0.45
GCN1-207ENST00000550471 DIRC1Q969H9 104 aa12.26□□□□□ -0.45
GCN1-207ENST00000550471 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
GCN1-207ENST00000550471 ALKBH7Q9BT30 221 aaPredicted RBP12.25□□□□□ -0.45
GCN1-207ENST00000550471 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
GCN1-207ENST00000550471 SCGB3A1Q96QR1 104 aa12.24□□□□□ -0.45
GCN1-207ENST00000550471 C2orf82Q6UX34 121 aa12.23□□□□□ -0.45
GCN1-207ENST00000550471 FAM19A5Q7Z5A7 132 aaPredicted RBP12.23□□□□□ -0.45
GCN1-207ENST00000550471 TOMM7Q9P0U1 55 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms