RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 TMEM141Q96I45 108 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 RPS10P5Q9NQ39 176 aa10.98□□□□□ -0.65
CHMP1A-208ENST00000550102 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
CHMP1A-208ENST00000550102 KIAA1644Q3SXP7 199 aa10.97□□□□□ -0.65
CHMP1A-208ENST00000550102 COX19Q49B96 90 aa10.97□□□□□ -0.65
CHMP1A-208ENST00000550102 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
CHMP1A-208ENST00000550102 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
CHMP1A-208ENST00000550102 MYCBP2O75592 4640 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 IGLV4-69A0A075B6H9 119 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 A0A087WYN8 130 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 IGKV2-24A0A0C4DH68 120 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 MT-ND6P03923 174 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 KRTAP10-4P60372 401 aaPredicted RBP10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 Q6ZN92 141 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 TEX43Q6ZNM6 134 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 OR10D4PQ8NGN7 298 aa10.96□□□□□ -0.65
CHMP1A-208ENST00000550102 A0A096LNI7 61 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 TGIF2-C20orf24A0A0A6YYL0 155 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 IGHV3OR16-9A0A0B4J2B5 98 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 SPAG11BQ08648 103 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
CHMP1A-208ENST00000550102 NPSP0C0P6 89 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 G0S2P27469 103 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
CHMP1A-208ENST00000550102 ORAOV1Q8WV07 137 aa10.93□□□□□ -0.66
CHMP1A-208ENST00000550102 APOC3P02656 99 aa10.92□□□□□ -0.66
CHMP1A-208ENST00000550102 Q6ZRU5 148 aa10.92□□□□□ -0.66
CHMP1A-208ENST00000550102 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
CHMP1A-208ENST00000550102 LOC107984640A0A0U1RRK4 108 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 IGIPA6NJ69 53 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 UBE2D1P51668 147 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 PAPPA-AS1Q5QFB9 102 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 LINC00242Q5T6M2 205 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 LINC00173Q6ZV60 143 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 SVBPQ8N300 66 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 STPG4Q8N801 248 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 VCX2Q9H322 139 aa10.91□□□□□ -0.66
CHMP1A-208ENST00000550102 A0A087WZ39 114 aa10.9□□□□□ -0.66
CHMP1A-208ENST00000550102 SNAPINO95295 136 aa10.9□□□□□ -0.66
CHMP1A-208ENST00000550102 AMELXQ99217 191 aa10.9□□□□□ -0.66
CHMP1A-208ENST00000550102 F8WDY8 70 aa10.89□□□□□ -0.67
CHMP1A-208ENST00000550102 FABP9Q0Z7S8 132 aa10.89□□□□□ -0.67
CHMP1A-208ENST00000550102 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
CHMP1A-208ENST00000550102 TOMM6Q96B49 74 aa10.89□□□□□ -0.67
CHMP1A-208ENST00000550102 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
CHMP1A-208ENST00000550102 PTTG1IPP53801 180 aa10.88□□□□□ -0.67
CHMP1A-208ENST00000550102 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
CHMP1A-208ENST00000550102 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
CHMP1A-208ENST00000550102 NDUFA1O15239 70 aa10.87□□□□□ -0.67
CHMP1A-208ENST00000550102 RNF151Q2KHN1 245 aa10.87□□□□□ -0.67
CHMP1A-208ENST00000550102 FA2HQ7L5A8 372 aa10.87□□□□□ -0.67
CHMP1A-208ENST00000550102 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
CHMP1A-208ENST00000550102 ERASQ7Z444 233 aa10.86□□□□□ -0.67
CHMP1A-208ENST00000550102 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
CHMP1A-208ENST00000550102 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
CHMP1A-208ENST00000550102 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 SEC11AP67812 179 aa10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 RPL18AQ02543 176 aaKnown RBP10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 LINC01561Q8N1V8 128 aa10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 SCGB3A1Q96QR1 104 aa10.85□□□□□ -0.67
CHMP1A-208ENST00000550102 J3QL48 77 aa10.84□□□□□ -0.67
CHMP1A-208ENST00000550102 FAM19A3Q7Z5A8 133 aa10.84□□□□□ -0.67
CHMP1A-208ENST00000550102 TRAPPC1Q9Y5R8 145 aa10.84□□□□□ -0.67
CHMP1A-208ENST00000550102 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.68
CHMP1A-208ENST00000550102 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
CHMP1A-208ENST00000550102 KRTAP29-1A8MX34 341 aaPredicted RBP10.83□□□□□ -0.68
CHMP1A-208ENST00000550102 HERVK_113P63121 156 aa10.83□□□□□ -0.68
CHMP1A-208ENST00000550102 HNRNPA3P51991 378 aaKnown RBP10.82□□□□□ -0.68
CHMP1A-208ENST00000550102 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
CHMP1A-208ENST00000550102 KIAA0087Q14695 138 aa10.81□□□□□ -0.68
CHMP1A-208ENST00000550102 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
CHMP1A-208ENST00000550102 UNQ6190/PRO20217Q6UXQ8 127 aa10.81□□□□□ -0.68
CHMP1A-208ENST00000550102 HERC1Q15751 4861 aa10.8□□□□□ -0.68
CHMP1A-208ENST00000550102 PRSS2P07478 247 aa10.8□□□□□ -0.68
CHMP1A-208ENST00000550102 PRR3P79522 188 aaKnown RBP10.8□□□□□ -0.68
CHMP1A-208ENST00000550102 C18orf32Q8TCD1 76 aa10.8□□□□□ -0.68
CHMP1A-208ENST00000550102 C6orf48Q9UBA6 75 aa10.8□□□□□ -0.68
CHMP1A-208ENST00000550102 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
CHMP1A-208ENST00000550102 PACRGQ96M98 296 aaPredicted RBP10.79□□□□□ -0.68
CHMP1A-208ENST00000550102 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
CHMP1A-208ENST00000550102 OXTP01178 125 aa10.78□□□□□ -0.68
CHMP1A-208ENST00000550102 TLX1NBP0CAT3 122 aa10.78□□□□□ -0.68
CHMP1A-208ENST00000550102 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
CHMP1A-208ENST00000550102 TOMM7Q9P0U1 55 aa10.78□□□□□ -0.68
CHMP1A-208ENST00000550102 CKS1BP61024 79 aa10.77□□□□□ -0.69
CHMP1A-208ENST00000550102 C9orf116Q5BN46 136 aaPredicted RBP10.77□□□□□ -0.69
CHMP1A-208ENST00000550102 Q8IZM0 81 aa10.77□□□□□ -0.69
CHMP1A-208ENST00000550102 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
CHMP1A-208ENST00000550102 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
CHMP1A-208ENST00000550102 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
CHMP1A-208ENST00000550102 CST9LQ9H4G1 147 aa10.76□□□□□ -0.69
CHMP1A-208ENST00000550102 A0A1W2PNN7 141 aa10.75□□□□□ -0.69
CHMP1A-208ENST00000550102 LINC00614P0C842 121 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms