RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ZNF22P17026 224 aaPredicted RBP11.7□□□□□ -0.54
LETMD1-220ENST00000549686 HERVK_113P61574 105 aa11.7□□□□□ -0.54
LETMD1-220ENST00000549686 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
LETMD1-220ENST00000549686 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
LETMD1-220ENST00000549686 COX11Q9Y6N1 276 aa11.7□□□□□ -0.54
LETMD1-220ENST00000549686 IGHV3OR16-9A0A0B4J2B5 98 aa11.69□□□□□ -0.54
LETMD1-220ENST00000549686 XCL1P47992 114 aa11.69□□□□□ -0.54
LETMD1-220ENST00000549686 LINC01561Q8N1V8 128 aa11.69□□□□□ -0.54
LETMD1-220ENST00000549686 S100A12P80511 92 aa11.68□□□□□ -0.54
LETMD1-220ENST00000549686 COX6A2Q02221 97 aa11.68□□□□□ -0.54
LETMD1-220ENST00000549686 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
LETMD1-220ENST00000549686 CDKN2A-AS1Q9UH64 79 aa11.68□□□□□ -0.54
LETMD1-220ENST00000549686 VPS13DQ5THJ4 4388 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 IGLV10-54A0A075B6I4 117 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 A0A087WZ39 114 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 LY6G6CO95867 125 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 VAMP8Q9BV40 100 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
LETMD1-220ENST00000549686 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
LETMD1-220ENST00000549686 GAGE12HA6NDE8 117 aa11.66□□□□□ -0.54
LETMD1-220ENST00000549686 COX7A2LO14548 114 aa11.66□□□□□ -0.54
LETMD1-220ENST00000549686 FOXI1Q12951 378 aa11.66□□□□□ -0.54
LETMD1-220ENST00000549686 Q9HAA7 133 aa11.66□□□□□ -0.54
LETMD1-220ENST00000549686 TMEM223A0PJW6 202 aa11.65□□□□□ -0.54
LETMD1-220ENST00000549686 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
LETMD1-220ENST00000549686 hDV102S1A0JD36 115 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 E9PLD3 99 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 APOMO95445 188 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 MALP21145 153 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 C5orf38Q86SI9 138 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 STPG4Q8N801 248 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 TENM2Q9NT68 2774 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 ALMS1Q8TCU4 4167 aa11.63□□□□□ -0.55
LETMD1-220ENST00000549686 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
LETMD1-220ENST00000549686 IGLV5-39A0A0G2JS06 123 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 Q6ZR54 194 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 LINC00518Q8N0U6 118 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 C12orf57Q99622 126 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
LETMD1-220ENST00000549686 DNAH1Q9P2D7 4330 aa11.6□□□□□ -0.55
LETMD1-220ENST00000549686 SPATA45Q537H7 98 aa11.6□□□□□ -0.55
LETMD1-220ENST00000549686 CDPF1Q6NVV7 123 aa11.6□□□□□ -0.55
LETMD1-220ENST00000549686 CFAP161Q6P656 301 aa11.6□□□□□ -0.55
LETMD1-220ENST00000549686 LEPROTO15243 131 aa11.59□□□□□ -0.55
LETMD1-220ENST00000549686 MAJINQ3KP22 176 aa11.59□□□□□ -0.55
LETMD1-220ENST00000549686 ANKRD39Q53RE8 183 aa11.59□□□□□ -0.55
LETMD1-220ENST00000549686 LYSTQ99698 3801 aa11.59□□□□□ -0.55
LETMD1-220ENST00000549686 IGHV3-64A0A075B6Q5 118 aa11.58□□□□□ -0.56
LETMD1-220ENST00000549686 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 J3QQQ9 107 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 M0R2N4 97 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 PSCAO43653 123 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 LGALS3P17931 250 aaKnown RBP11.56□□□□□ -0.56
LETMD1-220ENST00000549686 NMUP48645 174 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 C6orf223Q8N319 242 aa11.56□□□□□ -0.56
LETMD1-220ENST00000549686 LCE6AA0A183 80 aa11.55□□□□□ -0.56
LETMD1-220ENST00000549686 PRSS2P07478 247 aa11.55□□□□□ -0.56
LETMD1-220ENST00000549686 Q8IZM0 81 aa11.55□□□□□ -0.56
LETMD1-220ENST00000549686 COX7B2Q8TF08 81 aa11.55□□□□□ -0.56
LETMD1-220ENST00000549686 ORAOV1Q8WV07 137 aa11.55□□□□□ -0.56
LETMD1-220ENST00000549686 IGKV2D-26A0A0A0MRZ7 120 aa11.54□□□□□ -0.56
LETMD1-220ENST00000549686 F8WDY8 70 aa11.53□□□□□ -0.56
LETMD1-220ENST00000549686 COX8AP10176 69 aa11.53□□□□□ -0.56
LETMD1-220ENST00000549686 CXCL5P42830 114 aa11.53□□□□□ -0.56
LETMD1-220ENST00000549686 C1orf134Q5TEV5 83 aa11.53□□□□□ -0.56
LETMD1-220ENST00000549686 SPAG11BQ08648 103 aa11.52□□□□□ -0.57
LETMD1-220ENST00000549686 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.57
LETMD1-220ENST00000549686 Q6ZRN7 208 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-220ENST00000549686 TOMM7Q9P0U1 55 aa11.52□□□□□ -0.57
LETMD1-220ENST00000549686 GVQW2A0A096LPI5 108 aaPredicted RBP11.51□□□□□ -0.57
LETMD1-220ENST00000549686 DLEU1O43261 78 aa11.51□□□□□ -0.57
LETMD1-220ENST00000549686 C14orf177Q52M58 125 aa11.51□□□□□ -0.57
LETMD1-220ENST00000549686 MAPKAPK5-AS1Q8N8E1 139 aa11.51□□□□□ -0.57
LETMD1-220ENST00000549686 C15orf56Q8N910 161 aa11.51□□□□□ -0.57
LETMD1-220ENST00000549686 MYMXA0A1B0GTQ4 84 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 ZNF561-AS1K7EIQ3 104 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 TSPEAR-AS2P59090 65 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 NDUFA12Q9UI09 145 aa11.5□□□□□ -0.57
LETMD1-220ENST00000549686 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 TSTD3H0UI37 97 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 NDUFA1O15239 70 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 CKS1BP61024 79 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 HERV-K104P63124 156 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 SLC25A34Q6PIV7 304 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 PCP2Q8IVA1 136 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 BOD1L2Q8IYS8 172 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 C2orf48Q96LS8 159 aa11.49□□□□□ -0.57
LETMD1-220ENST00000549686 C14orf144Q96I85 54 aa11.48□□□□□ -0.57
LETMD1-220ENST00000549686 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
LETMD1-220ENST00000549686 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-220ENST00000549686 ZNF625Q96I27 306 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-220ENST00000549686 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
LETMD1-220ENST00000549686 HIGD2BQ4VC39 106 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms