RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 TRAV8-6A0A0B4J262 113 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 TMEM262E9PQX1 116 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 PANO1I0J062 215 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 PMCHP20382 165 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 SMIM15Q7Z3B0 74 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 SPATA12Q7Z6I5 190 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 ORMDL3Q8N138 153 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 C15orf56Q8N910 161 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 C18orf32Q8TCD1 76 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 GNB1LQ9BYB4 327 aa3.61□□□□□ -1.83
USP25-209ENST00000547201 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.6□□□□□ -1.83
USP25-209ENST00000547201 IGLV4-3A0A075B6K6 122 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 IGKV2D-24A0A075B6R9 120 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 A0A1B0GW15 77 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 H7C1H1 209 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 HLA-DQA1P01909 254 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 TRGC2P03986 189 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 KRTAP10-1P60331 282 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 REG3AQ06141 175 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 TTC32Q5I0X7 151 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 RNASEKQ6P5S7 137 aaKnown RBP3.6□□□□□ -1.83
USP25-209ENST00000547201 KCNIP4Q6PIL6 250 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 SH2D6Q7Z4S9 175 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 FRZBQ92765 325 aa3.6□□□□□ -1.83
USP25-209ENST00000547201 TRAV9-1A0A075B6T8 112 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 A0A087WX48 190 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 C5orf52A6NGY3 159 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 PRSS1P07477 247 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 S100PP25815 95 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 RPL32P62910 135 aaKnown RBP3.59□□□□□ -1.83
USP25-209ENST00000547201 COX6A2Q02221 97 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 NDUFA5Q16718 116 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 Q8N8P6 123 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.59□□□□□ -1.83
USP25-209ENST00000547201 C20orf78Q9BR46 151 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 MAP1LC3AQ9H492 121 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 SMCO4Q9NRQ5 59 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
USP25-209ENST00000547201 FAT1Q14517 4588 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 LINC01546A6NGU7 62 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 CCL25O15444 150 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 RAB5AP20339 215 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 FCER1GP30273 86 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 XCL1P47992 114 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 LAGE3Q14657 143 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 HIGD2BQ4VC39 106 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 MRPL52Q86TS9 123 aaKnown RBP3.58□□□□□ -1.84
USP25-209ENST00000547201 FAM19A2Q8N3H0 131 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 Q8N814 137 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 CHCHD10Q8WYQ3 142 aaPredicted RBP3.58□□□□□ -1.84
USP25-209ENST00000547201 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
USP25-209ENST00000547201 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 LINC00959A0A1B0GUT2 108 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 A0A1B0GUV1 79 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 PPBPP02775 128 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 S100A8P05109 93 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 LBHQ53QV2 105 aaPredicted RBP3.57□□□□□ -1.84
USP25-209ENST00000547201 ZNF664Q8N3J9 261 aa3.57□□□□□ -1.84
USP25-209ENST00000547201 UBE2L6O14933 153 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BKO60814 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 SERF1AO75920 110 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 CRPP02741 224 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BJP06899 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BOP23527 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BBP33778 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BDP58876 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BCP62807 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST2H2BEQ16778 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 PDZD11Q5EBL8 140 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.56□□□□□ -1.84
USP25-209ENST00000547201 AMMECR1LQ6DCA0 310 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 OR5A1Q8NGJ0 315 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BHQ93079 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 TOMM6Q96B49 74 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BNQ99877 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 HIST1H2BMQ99879 126 aa3.56□□□□□ -1.84
USP25-209ENST00000547201 IGLV4-69A0A075B6H9 119 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 A0A0J9YXV3 536 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 C16orf90A8MZG2 172 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 MT-ND6P03923 174 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 UBE2D1P51668 147 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 LINC00242Q5T6M2 205 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 LINC00336Q6ZUF6 198 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 AMELXQ99217 191 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 LAMTOR2Q9Y2Q5 125 aa3.55□□□□□ -1.84
USP25-209ENST00000547201 TRAV8-3A0A0A6YYJ7 113 aa3.54□□□□□ -1.84
USP25-209ENST00000547201 PSCAO43653 123 aa3.54□□□□□ -1.84
USP25-209ENST00000547201 ZNF25P17030 456 aaPredicted RBP3.54□□□□□ -1.84
USP25-209ENST00000547201 XGP55808 180 aa3.54□□□□□ -1.84
USP25-209ENST00000547201 RPL24P83731 157 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms