RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 HERV-K104P63124 156 aa16.62■□□□□ 0.25
FOXA1-202ENST00000545425 LINC00242Q5T6M2 205 aa16.62■□□□□ 0.25
FOXA1-202ENST00000545425 TRIAP1O43715 76 aa16.61■□□□□ 0.25
FOXA1-202ENST00000545425 H3BT86 120 aa16.61■□□□□ 0.25
FOXA1-202ENST00000545425 H7C2G1 150 aa16.6■□□□□ 0.25
FOXA1-202ENST00000545425 A0A1B0GV72 72 aa16.59■□□□□ 0.25
FOXA1-202ENST00000545425 TRBV6-4A0A1B0GX49 114 aa16.59■□□□□ 0.25
FOXA1-202ENST00000545425 OVOL2Q9BRP0 275 aa16.59■□□□□ 0.25
FOXA1-202ENST00000545425 CDC42SE2Q9NRR3 84 aa16.59■□□□□ 0.25
FOXA1-202ENST00000545425 Q6ZTI0 123 aa16.58■□□□□ 0.24
FOXA1-202ENST00000545425 TMEM243Q9BU79 118 aa16.58■□□□□ 0.24
FOXA1-202ENST00000545425 IGLV1-51P01701 117 aa16.57■□□□□ 0.24
FOXA1-202ENST00000545425 CITED2Q99967 270 aaPredicted RBP16.57■□□□□ 0.24
FOXA1-202ENST00000545425 A0A1W2PRX2 142 aa16.56■□□□□ 0.24
FOXA1-202ENST00000545425 SMIM1B2RUZ4 78 aa16.56■□□□□ 0.24
FOXA1-202ENST00000545425 LINC01006Q8NI28 216 aa16.56■□□□□ 0.24
FOXA1-202ENST00000545425 UBE2L6O14933 153 aa16.55■□□□□ 0.24
FOXA1-202ENST00000545425 NTM-AS1Q6ZSK4 140 aa16.55■□□□□ 0.24
FOXA1-202ENST00000545425 COX6A2Q02221 97 aa16.54■□□□□ 0.24
FOXA1-202ENST00000545425 Q9H8V8 135 aa16.54■□□□□ 0.24
FOXA1-202ENST00000545425 LST1O00453 97 aa16.54■□□□□ 0.24
FOXA1-202ENST00000545425 LINC00308Q8TCZ7 52 aa16.54■□□□□ 0.24
FOXA1-202ENST00000545425 NDUFA7O95182 113 aa16.53■□□□□ 0.24
FOXA1-202ENST00000545425 NOP10Q9NPE3 64 aaKnown RBP16.53■□□□□ 0.24
FOXA1-202ENST00000545425 A8MZ25 164 aa16.52■□□□□ 0.24
FOXA1-202ENST00000545425 GIG44P09565 113 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-202ENST00000545425 LINC00694P0DN24 101 aa16.52■□□□□ 0.24
FOXA1-202ENST00000545425 ZNF625Q96I27 306 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-202ENST00000545425 GAGE12JA6NER3 117 aa16.52■□□□□ 0.23
FOXA1-202ENST00000545425 GAGE4Q13068 117 aa16.52■□□□□ 0.23
FOXA1-202ENST00000545425 GAGE5Q13069 117 aa16.52■□□□□ 0.23
FOXA1-202ENST00000545425 C3orf56Q8N813 242 aa16.52■□□□□ 0.23
FOXA1-202ENST00000545425 PLAC8L1A1L4L8 177 aa16.51■□□□□ 0.23
FOXA1-202ENST00000545425 F5H768 121 aa16.51■□□□□ 0.23
FOXA1-202ENST00000545425 C19orf73Q9NVV2 129 aa16.51■□□□□ 0.23
FOXA1-202ENST00000545425 TRGV2A0A075B6R0 118 aa16.49■□□□□ 0.23
FOXA1-202ENST00000545425 C2orf82Q6UX34 121 aa16.49■□□□□ 0.23
FOXA1-202ENST00000545425 NTN5Q8WTR8 489 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-202ENST00000545425 UBE2WQ96B02 151 aa16.49■□□□□ 0.23
FOXA1-202ENST00000545425 CSNK1G2-AS1Q8NCQ2 148 aa16.49■□□□□ 0.23
FOXA1-202ENST00000545425 TRAV13-1A0A0B4J241 112 aa16.48■□□□□ 0.23
FOXA1-202ENST00000545425 PF4P02776 101 aa16.48■□□□□ 0.23
FOXA1-202ENST00000545425 C11orf44Q8N8P7 122 aa16.48■□□□□ 0.23
FOXA1-202ENST00000545425 XGP55808 180 aa16.47■□□□□ 0.23
FOXA1-202ENST00000545425 FBN3Q75N90 2809 aa16.47■□□□□ 0.23
FOXA1-202ENST00000545425 TENM1Q9UKZ4 2725 aa16.46■□□□□ 0.23
FOXA1-202ENST00000545425 TRGV4A0A0C4DH28 118 aa16.45■□□□□ 0.22
FOXA1-202ENST00000545425 MRPL23Q16540 153 aaKnown RBP16.45■□□□□ 0.22
FOXA1-202ENST00000545425 DEFB121Q5J5C9 76 aa16.45■□□□□ 0.22
FOXA1-202ENST00000545425 MEIG1Q5JSS6 88 aa16.45■□□□□ 0.22
FOXA1-202ENST00000545425 ANK2Q01484 3957 aa16.45■□□□□ 0.22
FOXA1-202ENST00000545425 FAM222AQ5U5X8 452 aa16.45■□□□□ 0.22
FOXA1-202ENST00000545425 FAM240AA0A1B0GVK7 77 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 COX7A2LO14548 114 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 GAGE7O76087 117 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 MT-ATP8P03928 68 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 GAGE12FP0CL80 117 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 GAGE12GP0CL81 117 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 GAGE12IP0CL82 117 aa16.44■□□□□ 0.22
FOXA1-202ENST00000545425 SHISA2Q6UWI4 295 aa16.43■□□□□ 0.22
FOXA1-202ENST00000545425 TRAV8-4A0A0B4J246 113 aa16.42■□□□□ 0.22
FOXA1-202ENST00000545425 NPC2P61916 151 aa16.42■□□□□ 0.22
FOXA1-202ENST00000545425 KIR2DL5BQ8NHK3 375 aa16.42■□□□□ 0.22
FOXA1-202ENST00000545425 CKS1BP61024 79 aa16.42■□□□□ 0.22
FOXA1-202ENST00000545425 TRBV6-8A0A0A6YYG3 113 aa16.4■□□□□ 0.22
FOXA1-202ENST00000545425 TRAV13-2A0A0B4J235 113 aa16.4■□□□□ 0.22
FOXA1-202ENST00000545425 RPL35AP18077 110 aaKnown RBP16.4■□□□□ 0.22
FOXA1-202ENST00000545425 HIST2H2BDQ6DRA6 164 aa16.4■□□□□ 0.22
FOXA1-202ENST00000545425 TRACP01848 142 aa16.39■□□□□ 0.21
FOXA1-202ENST00000545425 FHL2Q14192 279 aa16.39■□□□□ 0.21
FOXA1-202ENST00000545425 Q6Q795 121 aa16.39■□□□□ 0.21
FOXA1-202ENST00000545425 DAND5Q8N907 189 aa16.39■□□□□ 0.21
FOXA1-202ENST00000545425 COX7B2Q8TF08 81 aa16.39■□□□□ 0.21
FOXA1-202ENST00000545425 LINC00612Q8N6U2 182 aa16.38■□□□□ 0.21
FOXA1-202ENST00000545425 CITED1Q99966 193 aa16.38■□□□□ 0.21
FOXA1-202ENST00000545425 SMIM9A6NGZ8 99 aa16.37■□□□□ 0.21
FOXA1-202ENST00000545425 CLEC2BQ92478 149 aa16.37■□□□□ 0.21
FOXA1-202ENST00000545425 TEX49A0A1B0GTD5 131 aa16.36■□□□□ 0.21
FOXA1-202ENST00000545425 SNCGO76070 127 aa16.36■□□□□ 0.21
FOXA1-202ENST00000545425 SOSTDC1Q6X4U4 206 aa16.35■□□□□ 0.21
FOXA1-202ENST00000545425 TRAV26-1A0A087WT03 109 aa16.35■□□□□ 0.21
FOXA1-202ENST00000545425 ACYP1P07311 99 aa16.34■□□□□ 0.21
FOXA1-202ENST00000545425 LINC01561Q8N1V8 128 aa16.34■□□□□ 0.21
FOXA1-202ENST00000545425 A0A087WZ39 114 aa16.33■□□□□ 0.2
FOXA1-202ENST00000545425 IBA57-AS1B1ANH7 110 aa16.33■□□□□ 0.2
FOXA1-202ENST00000545425 IGHV3OR16-9A0A0B4J2B5 98 aa16.32■□□□□ 0.2
FOXA1-202ENST00000545425 WFDC10AQ9H1F0 79 aa16.32■□□□□ 0.2
FOXA1-202ENST00000545425 GAGE6Q13070 117 aa16.31■□□□□ 0.2
FOXA1-202ENST00000545425 CHCHD5Q9BSY4 110 aa16.31■□□□□ 0.2
FOXA1-202ENST00000545425 LOC100131303A0A0U1RQF7 123 aa16.31■□□□□ 0.2
FOXA1-202ENST00000545425 RPL28P46779 137 aaKnown RBP16.31■□□□□ 0.2
FOXA1-202ENST00000545425 GAGE2BQ13066 116 aa16.3■□□□□ 0.2
FOXA1-202ENST00000545425 GAGE2EQ4V326 116 aa16.3■□□□□ 0.2
FOXA1-202ENST00000545425 GAGE2DQ9UEU5 116 aa16.3■□□□□ 0.2
FOXA1-202ENST00000545425 NBEAL1Q6ZS30 2694 aa16.29■□□□□ 0.2
FOXA1-202ENST00000545425 A0A1B0GUV1 79 aa16.29■□□□□ 0.2
FOXA1-202ENST00000545425 CRPP02741 224 aa16.29■□□□□ 0.2
FOXA1-202ENST00000545425 LINC00482Q8N8I6 264 aa16.26■□□□□ 0.19
FOXA1-202ENST00000545425 A0A0U1RRA0 63 aa16.26■□□□□ 0.19
FOXA1-202ENST00000545425 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms