RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 ALKAL2Q6UX46 152 aa1.22□□□□□ -2.21
COPA-206ENST00000545266 SPCS1Q9Y6A9 102 aa1.22□□□□□ -2.21
COPA-206ENST00000545266 MYO7BQ6PIF6 2116 aa1.22□□□□□ -2.21
COPA-206ENST00000545266 KNDC1Q76NI1 1749 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 ROS1P08922 2347 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 CCDC88BA6NC98 1476 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 ETDBQ3ZM63 59 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 BAGE2Q86Y30 109 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 S100A13Q99584 98 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 LINC01558Q9Y6Z2 57 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 IQGAP3Q86VI3 1631 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 TECTAO75443 2155 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 CFAP74Q9C0B2 1584 aa1.21□□□□□ -2.22
COPA-206ENST00000545266 CRYBG1Q9Y4K1 1723 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 ABCC2Q92887 1545 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 C5P01031 1676 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 SHPRHQ149N8 1683 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 IQSEC2Q5JU85 1478 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 RAPGEF6Q8TEU7 1601 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 M0R3E3 92 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 UQCR11O14957 56 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 SAA2P0DJI9 122 aaPredicted RBP1.2□□□□□ -2.22
COPA-206ENST00000545266 CFAP126Q5VTH2 177 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 ZNF720Q7Z2F6 126 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 ABCA8O94911 1581 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 LRRC37A2A6NM11 1700 aa1.2□□□□□ -2.22
COPA-206ENST00000545266 NHSL1Q5SYE7 1610 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 A0A096LNT2 108 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 ZNF815PA8K554 130 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 F8WEM9 126 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 ADAMTS12P58397 1594 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 FDCSPQ8NFU4 85 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 MYO5CQ9NQX4 1742 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 RABAC1Q9UI14 185 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 NEXMIFQ5QGS0 1516 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 MED13LQ71F56 2210 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 NCOA6Q14686 2063 aaPredicted RBP1.19□□□□□ -2.22
COPA-206ENST00000545266 PAPPA2Q9BXP8 1791 aa1.19□□□□□ -2.22
COPA-206ENST00000545266 TARBP1Q13395 1621 aaKnown RBP1.18□□□□□ -2.22
COPA-206ENST00000545266 ALKQ9UM73 1620 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 A0A087WVE0 104 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 F2Z2F3 143 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 WFDC2Q14508 124 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 PLAC4Q8WY50 150 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 ST20Q9HBF5 79 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 ZC3H13Q5T200 1668 aaKnown RBP1.18□□□□□ -2.22
COPA-206ENST00000545266 PTPN23Q9H3S7 1636 aa1.18□□□□□ -2.22
COPA-206ENST00000545266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.17□□□□□ -2.22
COPA-206ENST00000545266 GVQW2A0A096LPI5 108 aaPredicted RBP1.17□□□□□ -2.22
COPA-206ENST00000545266 A0A1B0GWA3 101 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 RPL37P61927 97 aaKnown RBP1.17□□□□□ -2.22
COPA-206ENST00000545266 PRB3Q04118 309 aaPredicted RBP1.17□□□□□ -2.22
COPA-206ENST00000545266 COX17Q14061 63 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 ADIRFQ15847 76 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 NMSQ5H8A3 153 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 SMIM11BQ8TCY0 68 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 PSENENQ9NZ42 101 aa1.17□□□□□ -2.22
COPA-206ENST00000545266 RGPD8O14715 1765 aaPredicted RBP1.16□□□□□ -2.22
COPA-206ENST00000545266 RGPD5Q99666 1765 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 PKD1L3Q7Z443 1732 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 C7orf77A4D0Y5 90 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 G3V318 75 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 BCE1O60756 84 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 MGPP08493 103 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 SPINK13Q1W4C9 94 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 SMIM4Q8WVI0 70 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 CCDC141Q6ZP82 1450 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 RGPD2P0DJD1 1756 aa1.16□□□□□ -2.22
COPA-206ENST00000545266 XRN1Q8IZH2 1706 aaKnown RBP1.15□□□□□ -2.22
COPA-206ENST00000545266 HMGN2P05204 90 aaKnown RBP1.15□□□□□ -2.23
COPA-206ENST00000545266 ARMS2P0C7Q2 107 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 SPINT3P49223 89 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 SMIM11AP58511 58 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 SNRPFP62306 86 aaKnown RBP1.15□□□□□ -2.23
COPA-206ENST00000545266 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 Q6ZRX8 168 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 SPRR4Q96PI1 79 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 ARFGEF2Q9Y6D5 1785 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 ABCA1O95477 2261 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 F5P12259 2224 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 ANKRD36A6QL64 1941 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 CUX1P39880 1505 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 KCPQ6ZWJ8 1503 aa1.15□□□□□ -2.23
COPA-206ENST00000545266 C1orf167Q5SNV9 1468 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 K7EIL1 84 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 GCHFRP30047 84 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 BVES-AS1Q5T3Y7 98 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 ERICH3Q5RHP9 1530 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 UGGT2Q9NYU1 1516 aa1.14□□□□□ -2.23
COPA-206ENST00000545266 LRRC9Q6ZRR7 1453 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 IQCF6A8MYZ5 107 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 H3BUT2 72 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 LINC00643Q86TS7 51 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 LINC01600Q96MT4 127 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 LRP6O75581 1613 aa1.13□□□□□ -2.23
COPA-206ENST00000545266 ASCC3Q8N3C0 2202 aaKnown RBP1.13□□□□□ -2.23
COPA-206ENST00000545266 SCN11AQ9UI33 1791 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms