RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 USP17L23D6RBM5 183 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 APOMO95445 188 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 LINC00310P59036 64 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 HERVK_113P63121 156 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 CST9LQ9H4G1 147 aa7.75□□□□□ -1.17
SNHG1-221ENST00000544983 IGHV1-58A0A0C4DH39 117 aa7.74□□□□□ -1.17
SNHG1-221ENST00000544983 LEPROTL1O95214 131 aa7.74□□□□□ -1.17
SNHG1-221ENST00000544983 MALP21145 153 aa7.74□□□□□ -1.17
SNHG1-221ENST00000544983 FAM19A2Q8N3H0 131 aa7.74□□□□□ -1.17
SNHG1-221ENST00000544983 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
SNHG1-221ENST00000544983 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
SNHG1-221ENST00000544983 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
SNHG1-221ENST00000544983 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
SNHG1-221ENST00000544983 PRSS1P07477 247 aa7.73□□□□□ -1.17
SNHG1-221ENST00000544983 DNAH10Q8IVF4 4471 aa7.73□□□□□ -1.17
SNHG1-221ENST00000544983 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 A0A087WZ39 114 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 GVQW2A0A096LPI5 108 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-221ENST00000544983 LECT2O14960 151 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 NUPR1O60356 82 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 NDUFA6P56556 154 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 WFDC2Q14508 124 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 SPATA12Q7Z6I5 190 aa7.72□□□□□ -1.17
SNHG1-221ENST00000544983 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
SNHG1-221ENST00000544983 F8WDY8 70 aa7.71□□□□□ -1.18
SNHG1-221ENST00000544983 ZC2HC1BQ5TFG8 222 aa7.71□□□□□ -1.18
SNHG1-221ENST00000544983 C15orf56Q8N910 161 aa7.71□□□□□ -1.18
SNHG1-221ENST00000544983 OR10D4PQ8NGN7 298 aa7.71□□□□□ -1.18
SNHG1-221ENST00000544983 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
SNHG1-221ENST00000544983 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-221ENST00000544983 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
SNHG1-221ENST00000544983 COX6A2Q02221 97 aa7.7□□□□□ -1.18
SNHG1-221ENST00000544983 C5orf38Q86SI9 138 aa7.7□□□□□ -1.18
SNHG1-221ENST00000544983 IGHV3-64A0A075B6Q5 118 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 H3BRM9 83 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 ZNF561-AS1K7EIQ3 104 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 S100A6P06703 90 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 CNBPP62633 177 aaKnown RBP7.69□□□□□ -1.18
SNHG1-221ENST00000544983 MAP1LC3CQ9BXW4 147 aa7.69□□□□□ -1.18
SNHG1-221ENST00000544983 FABP4P15090 132 aa7.68□□□□□ -1.18
SNHG1-221ENST00000544983 KRTAP10-2P60368 255 aa7.68□□□□□ -1.18
SNHG1-221ENST00000544983 LINC00469Q8N7U9 141 aa7.68□□□□□ -1.18
SNHG1-221ENST00000544983 C2orf48Q96LS8 159 aa7.68□□□□□ -1.18
SNHG1-221ENST00000544983 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
SNHG1-221ENST00000544983 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
SNHG1-221ENST00000544983 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-221ENST00000544983 F8VRH5 84 aa7.67□□□□□ -1.18
SNHG1-221ENST00000544983 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
SNHG1-221ENST00000544983 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
SNHG1-221ENST00000544983 PKIGQ9Y2B9 76 aa7.67□□□□□ -1.18
SNHG1-221ENST00000544983 HECTD4Q9Y4D8 3996 aa7.67□□□□□ -1.18
SNHG1-221ENST00000544983 IGLV4-69A0A075B6H9 119 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 C16orf90A8MZG2 172 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 GCSHP23434 173 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 PLNP26678 52 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 HIGD2BQ4VC39 106 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
SNHG1-221ENST00000544983 S100A2P29034 98 aa7.65□□□□□ -1.18
SNHG1-221ENST00000544983 ODF1Q14990 250 aa7.65□□□□□ -1.18
SNHG1-221ENST00000544983 C9orf163Q8N9P6 203 aa7.65□□□□□ -1.18
SNHG1-221ENST00000544983 MRPL35Q9NZE8 188 aaKnown RBP7.65□□□□□ -1.18
SNHG1-221ENST00000544983 PKD1P98161 4303 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 PRSS2P07478 247 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 CXCL5P42830 114 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 AKR1D1P51857 326 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 PET117Q6UWS5 81 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 Q8IZM0 81 aa7.64□□□□□ -1.19
SNHG1-221ENST00000544983 C11orf86A6NJI1 115 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 SMIM1B2RUZ4 78 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 H0Y8G0 127 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 DPM2O94777 84 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
SNHG1-221ENST00000544983 RNF151Q2KHN1 245 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 CARD19Q96LW7 228 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 CAMK2N2Q96S95 79 aa7.63□□□□□ -1.19
SNHG1-221ENST00000544983 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 NDUFA1O15239 70 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 SLPIP03973 132 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 CKS1BP61024 79 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 KIAA0087Q14695 138 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 HIST3H2BBQ8N257 126 aa7.62□□□□□ -1.19
SNHG1-221ENST00000544983 IGLV5-39A0A0G2JS06 123 aa7.61□□□□□ -1.19
SNHG1-221ENST00000544983 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 C20orf202A1L168 122 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 C5orf52A6NGY3 159 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 IGKCP01834 107 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 LINC01545Q5VT33 79 aa7.6□□□□□ -1.19
SNHG1-221ENST00000544983 COX7B2Q8TF08 81 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms