RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 AMELXQ99217 191 aa6.97□□□□□ -1.29
MDH1-216ENST00000544381 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
MDH1-216ENST00000544381 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 H3BNG1 76 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
MDH1-216ENST00000544381 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
MDH1-216ENST00000544381 ZFAND6Q6FIF0 208 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 Q6ZUT4 128 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 MIEN1Q9BRT3 115 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
MDH1-216ENST00000544381 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 TMEM262E9PQX1 116 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 DDTP30046 118 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 FAM104AQ969W3 186 aa6.95□□□□□ -1.3
MDH1-216ENST00000544381 KMT2AQ03164 3969 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 TRAV10A0A0B4J240 114 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 A0A0J9YXV3 536 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 NMUP48645 174 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 TCTAP57738 103 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 HERVK_113P61574 105 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 NFE4Q86UQ8 179 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 CHAC1Q9BUX1 264 aa6.94□□□□□ -1.3
MDH1-216ENST00000544381 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
MDH1-216ENST00000544381 GEMIN7Q9H840 131 aaKnown RBP6.93□□□□□ -1.3
MDH1-216ENST00000544381 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
MDH1-216ENST00000544381 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
MDH1-216ENST00000544381 COX8AP10176 69 aa6.92□□□□□ -1.3
MDH1-216ENST00000544381 UBE2D1P51668 147 aa6.92□□□□□ -1.3
MDH1-216ENST00000544381 LELP1Q5T871 98 aa6.92□□□□□ -1.3
MDH1-216ENST00000544381 TRAV13-1A0A0B4J241 112 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 TRAV8-6A0A0B4J262 113 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 A0A1B0GUV1 79 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 LINC00587B1AMM8 73 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 HNRNPA3P51991 378 aaKnown RBP6.91□□□□□ -1.3
MDH1-216ENST00000544381 SEC11AP67812 179 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 LYPD5Q6UWN5 251 aa6.91□□□□□ -1.3
MDH1-216ENST00000544381 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 E9PLD3 99 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
MDH1-216ENST00000544381 TIRAPP58753 221 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 RBX1P62877 108 aa6.9□□□□□ -1.3
MDH1-216ENST00000544381 HECTD4Q9Y4D8 3996 aa6.9□□□□□ -1.31
MDH1-216ENST00000544381 IGKV3OR2-268A0A0C4DH90 116 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 TMEM223A0PJW6 202 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 H3BRM9 83 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 HERVK_113P63121 156 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 PCP2Q8IVA1 136 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 C15orf53Q8NAA6 179 aa6.89□□□□□ -1.31
MDH1-216ENST00000544381 DLEU1O43261 78 aa6.88□□□□□ -1.31
MDH1-216ENST00000544381 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
MDH1-216ENST00000544381 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
MDH1-216ENST00000544381 LEPROTO15243 131 aa6.87□□□□□ -1.31
MDH1-216ENST00000544381 ANGP03950 147 aaKnown RBP6.87□□□□□ -1.31
MDH1-216ENST00000544381 LGALS3P17931 250 aaKnown RBP6.87□□□□□ -1.31
MDH1-216ENST00000544381 CTAG1AP78358 180 aa6.87□□□□□ -1.31
MDH1-216ENST00000544381 SS18Q15532 418 aa6.87□□□□□ -1.31
MDH1-216ENST00000544381 PLEKHB2Q96CS7 222 aa6.87□□□□□ -1.31
MDH1-216ENST00000544381 TP73-AS1Q9UF72 201 aa6.87□□□□□ -1.31
MDH1-216ENST00000544381 MRPS16Q9Y3D3 137 aaKnown RBP6.87□□□□□ -1.31
MDH1-216ENST00000544381 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 IGLV5-45A0A087WSX0 123 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 SIVA1O15304 175 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 COX6A2Q02221 97 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 ESRGQ1W209 222 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 CDKN2A-AS1Q9UH64 79 aa6.86□□□□□ -1.31
MDH1-216ENST00000544381 MYMXA0A1B0GTQ4 84 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 LINC00959A0A1B0GUT2 108 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 IGLL5B9A064 214 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 J3QQQ9 107 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 CCL25O15444 150 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 SPINK8P0C7L1 97 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
MDH1-216ENST00000544381 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
MDH1-216ENST00000544381 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
MDH1-216ENST00000544381 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
MDH1-216ENST00000544381 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 M0R143 59 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 IGHV3-33P01772 117 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 CCL18P55774 89 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 REG3AQ06141 175 aa6.83□□□□□ -1.32
MDH1-216ENST00000544381 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms