RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 SPCS1Q9Y6A9 102 aa12.55□□□□□ -0.4
CHERP-202ENST00000544299 IGHV1-58A0A0C4DH39 117 aa12.54□□□□□ -0.4
CHERP-202ENST00000544299 GEMIN7Q9H840 131 aaKnown RBP12.54□□□□□ -0.4
CHERP-202ENST00000544299 DNAH9Q9NYC9 4486 aa12.54□□□□□ -0.4
CHERP-202ENST00000544299 IGLL5B9A064 214 aa12.53□□□□□ -0.4
CHERP-202ENST00000544299 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
CHERP-202ENST00000544299 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CHERP-202ENST00000544299 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
CHERP-202ENST00000544299 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
CHERP-202ENST00000544299 TSPEAR-AS2P59090 65 aa12.53□□□□□ -0.4
CHERP-202ENST00000544299 MRPL23Q16540 153 aaKnown RBP12.53□□□□□ -0.4
CHERP-202ENST00000544299 IGLV5-45A0A087WSX0 123 aa12.52□□□□□ -0.41
CHERP-202ENST00000544299 UBE2D1P51668 147 aa12.52□□□□□ -0.41
CHERP-202ENST00000544299 HERVK_113P63121 156 aa12.52□□□□□ -0.41
CHERP-202ENST00000544299 H3BNG1 76 aa12.51□□□□□ -0.41
CHERP-202ENST00000544299 GAGE6Q13070 117 aa12.51□□□□□ -0.41
CHERP-202ENST00000544299 LYRM7Q5U5X0 104 aa12.51□□□□□ -0.41
CHERP-202ENST00000544299 K7ERJ3 54 aa12.51□□□□□ -0.41
CHERP-202ENST00000544299 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
CHERP-202ENST00000544299 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 UBE2L6O14933 153 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 TMEM101Q96IK0 257 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 CHCHD5Q9BSY4 110 aa12.5□□□□□ -0.41
CHERP-202ENST00000544299 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
CHERP-202ENST00000544299 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
CHERP-202ENST00000544299 CDC42SE2Q9NRR3 84 aa12.48□□□□□ -0.41
CHERP-202ENST00000544299 IGLV4-60A0A075B6I1 120 aa12.46□□□□□ -0.41
CHERP-202ENST00000544299 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.46□□□□□ -0.41
CHERP-202ENST00000544299 TRAV10A0A0B4J240 114 aa12.46□□□□□ -0.41
CHERP-202ENST00000544299 TIMM17BO60830 172 aa12.46□□□□□ -0.41
CHERP-202ENST00000544299 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.42
CHERP-202ENST00000544299 A0A0J9YXY3 114 aa12.45□□□□□ -0.42
CHERP-202ENST00000544299 NAA38Q9BRA0 125 aaKnown RBP12.45□□□□□ -0.42
CHERP-202ENST00000544299 NDUFA12Q9UI09 145 aa12.45□□□□□ -0.42
CHERP-202ENST00000544299 LELP1Q5T871 98 aa12.44□□□□□ -0.42
CHERP-202ENST00000544299 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
CHERP-202ENST00000544299 K7ERU9 68 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 SPANXDQ9BXN6 97 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 PGPEP1Q9NXJ5 209 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 SPANXCQ9NY87 97 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 A0A0B4J2C4 111 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 F8W1H4 67 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 RBX1P62877 108 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 C10orf126Q8N4M7 172 aa12.43□□□□□ -0.42
CHERP-202ENST00000544299 IGHV3-64A0A075B6Q5 118 aa12.42□□□□□ -0.42
CHERP-202ENST00000544299 A0A1B0GUV1 79 aa12.42□□□□□ -0.42
CHERP-202ENST00000544299 LINC00242Q5T6M2 205 aa12.42□□□□□ -0.42
CHERP-202ENST00000544299 COPS9Q8WXC6 57 aa12.42□□□□□ -0.42
CHERP-202ENST00000544299 IGLV5-39A0A0G2JS06 123 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 NDUFA1O15239 70 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
CHERP-202ENST00000544299 Q8N3U1 123 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 CDKN2A-AS1Q9UH64 79 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 IFITM1P13164 125 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
CHERP-202ENST00000544299 OCIAD2Q56VL3 154 aa12.41□□□□□ -0.42
CHERP-202ENST00000544299 STAB2Q8WWQ8 2551 aa12.4□□□□□ -0.42
CHERP-202ENST00000544299 TRAV8-3A0A0A6YYJ7 113 aa12.4□□□□□ -0.42
CHERP-202ENST00000544299 TMEM262E9PQX1 116 aa12.4□□□□□ -0.42
CHERP-202ENST00000544299 SPINK8P0C7L1 97 aa12.4□□□□□ -0.42
CHERP-202ENST00000544299 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 APOMO95445 188 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 CFC1P0CG37 223 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 CBY1Q9Y3M2 126 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 MEGF8Q7Z7M0 2845 aa12.39□□□□□ -0.43
CHERP-202ENST00000544299 TRAV13-1A0A0B4J241 112 aa12.38□□□□□ -0.43
CHERP-202ENST00000544299 COX6A2Q02221 97 aa12.38□□□□□ -0.43
CHERP-202ENST00000544299 ESRGQ1W209 222 aa12.38□□□□□ -0.43
CHERP-202ENST00000544299 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
CHERP-202ENST00000544299 TSPAN13O95857 204 aa12.38□□□□□ -0.43
CHERP-202ENST00000544299 MIAQ16674 131 aa12.38□□□□□ -0.43
CHERP-202ENST00000544299 A4D1N5 150 aa12.37□□□□□ -0.43
CHERP-202ENST00000544299 HERV-K104P63124 156 aa12.37□□□□□ -0.43
CHERP-202ENST00000544299 MUSTN1Q8IVN3 82 aa12.37□□□□□ -0.43
CHERP-202ENST00000544299 LITAFQ99732 161 aa12.37□□□□□ -0.43
CHERP-202ENST00000544299 PPDPFQ9H3Y8 114 aa12.36□□□□□ -0.43
CHERP-202ENST00000544299 C15orf53Q8NAA6 179 aa12.35□□□□□ -0.43
CHERP-202ENST00000544299 SMIM1B2RUZ4 78 aa12.34□□□□□ -0.43
CHERP-202ENST00000544299 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
CHERP-202ENST00000544299 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
CHERP-202ENST00000544299 IGKV3OR2-268A0A0C4DH90 116 aa12.33□□□□□ -0.44
CHERP-202ENST00000544299 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
CHERP-202ENST00000544299 LINC00959A0A1B0GUT2 108 aa12.33□□□□□ -0.44
CHERP-202ENST00000544299 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
CHERP-202ENST00000544299 PRSS2P07478 247 aa12.32□□□□□ -0.44
CHERP-202ENST00000544299 CLPSL2Q6UWE3 100 aa12.32□□□□□ -0.44
CHERP-202ENST00000544299 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
CHERP-202ENST00000544299 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
CHERP-202ENST00000544299 H3BMG7 143 aa12.3□□□□□ -0.44
CHERP-202ENST00000544299 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
CHERP-202ENST00000544299 ANGP03950 147 aaKnown RBP12.3□□□□□ -0.44
CHERP-202ENST00000544299 J3QR89 54 aa12.3□□□□□ -0.44
CHERP-202ENST00000544299 Q9H8V8 135 aa12.29□□□□□ -0.44
CHERP-202ENST00000544299 IGHV3OR16-9A0A0B4J2B5 98 aa12.28□□□□□ -0.44
CHERP-202ENST00000544299 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms