RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 H3BT86 120 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 M0R2N4 97 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 CYB5BO43169 146 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 ZNF90Q03938 601 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 NMSQ5H8A3 153 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 PSMG4Q5JS54 123 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 OR4C16Q8NGL9 310 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 TSC22D3Q99576 134 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 SLC35B3Q9H1N7 401 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 FKBP11Q9NYL4 201 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 NAT8Q9UHE5 227 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 RABAC1Q9UI14 185 aa1.71□□□□□ -2.13
SCFD1-207ENST00000544052 TRAV10A0A0B4J240 114 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 CRYM-AS1A6NIL9 109 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 GABARAPH6UMI1 98 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 PITX3O75364 302 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 IFNA17P01571 189 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 TRGC2P03986 189 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 CXCL1P09341 107 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 HLA-DRB4P13762 266 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 MIFP14174 115 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 RPL28P46779 137 aaKnown RBP1.71□□□□□ -2.14
SCFD1-207ENST00000544052 YPEL3P61236 119 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-207ENST00000544052 ERHP84090 104 aaKnown RBP1.71□□□□□ -2.14
SCFD1-207ENST00000544052 RNASE10Q5GAN6 216 aaKnown RBP1.71□□□□□ -2.14
SCFD1-207ENST00000544052 TMEM229BQ8NBD8 167 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 SMIM4Q8WVI0 70 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 NAA60Q9H7X0 242 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 HLA-DRB4X5D2U9 266 aa1.71□□□□□ -2.14
SCFD1-207ENST00000544052 UBR4Q5T4S7 5183 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 A0A087WXM4 84 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 DEFB131BA0A096LNP1 70 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 FABP5P3A8MUU1 101 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 LINC00587B1AMM8 73 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 J3KT08 172 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 TMEM256-PLSCR3K7ERE1 68 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 RRN3P1Q2M238 152 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 SCGB2B2Q4G0G5 96 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 SMCR5Q8TEV8 140 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 IMMP2LQ96T52 175 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 Q9H521 79 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 FAM25AB3EWG3 89 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 FAM25CB3EWG5 89 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 FAM25GB3EWG6 89 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 CORTO00230 105 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 IFNA4P05014 189 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 SNCAP37840 140 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 LYRM7Q5U5X0 104 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 IMUPQ9GZP8 106 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 COPZ2Q9P299 210 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 V9GYH0 126 aa1.7□□□□□ -2.14
SCFD1-207ENST00000544052 LOC107984640A0A0U1RRK4 108 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 CEBPZOSA8MTT3 80 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 K7ERJ3 54 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 M0R2Z0 102 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 AKAIN1P0CW23 69 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 GZMBP10144 247 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 IAPPP10997 89 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 SLC25A4P12235 298 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 FUSP35637 526 aaKnown RBP eCLIP1.69□□□□□ -2.14
SCFD1-207ENST00000544052 EIF2B2P49770 351 aaKnown RBP1.69□□□□□ -2.14
SCFD1-207ENST00000544052 Q5XG85 94 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 PATE2Q6UY27 113 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 FOXI2Q6ZQN5 318 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 C2orf50Q96LR7 162 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 VPS25Q9BRG1 176 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 PKHD1L1Q86WI1 4243 aa1.69□□□□□ -2.14
SCFD1-207ENST00000544052 TRAV12-2A0A075B6T6 113 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 TRAV30A0A087WSZ9 112 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 SMIM31A0A1B0GVY4 71 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 CCDC160A6NGH7 325 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 H3BRN7 92 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 IFNA10P01566 189 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 RNASE4P34096 147 aaKnown RBP1.68□□□□□ -2.14
SCFD1-207ENST00000544052 XCL1P47992 114 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 HIST1H1AQ02539 215 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-207ENST00000544052 SPINK13Q1W4C9 94 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 NUP35Q8NFH5 326 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 OR4B1Q8NGF8 309 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 LINC00052Q96N35 136 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 TRGV9Q99603 122 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 SLC25A21Q9BQT8 299 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-207ENST00000544052 MIEN1Q9BRT3 115 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 TMEM70Q9BUB7 260 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 PDCD10Q9BUL8 212 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-207ENST00000544052 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
SCFD1-207ENST00000544052 TMEM189A5PLL7 270 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 C11orf86A6NJI1 115 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 C9JAW5 83 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 SFT2D2O95562 160 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 MT-ND4LP03901 98 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 SPART-AS1P0CW21 52 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 P0DMU3 169 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 FAM231AP0DMU4 169 aa1.68□□□□□ -2.14
SCFD1-207ENST00000544052 FAM231CP0DMU5 169 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms