RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 GEMIN7Q9H840 131 aaKnown RBP10.82□□□□□ -0.68
XRCC1-202ENST00000543982 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
XRCC1-202ENST00000543982 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
XRCC1-202ENST00000543982 IGKV3OR2-268A0A0C4DH90 116 aa10.81□□□□□ -0.68
XRCC1-202ENST00000543982 M0R143 59 aa10.81□□□□□ -0.68
XRCC1-202ENST00000543982 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
XRCC1-202ENST00000543982 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
XRCC1-202ENST00000543982 CCL18P55774 89 aa10.8□□□□□ -0.68
XRCC1-202ENST00000543982 HERVK_113P63121 156 aa10.8□□□□□ -0.68
XRCC1-202ENST00000543982 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
XRCC1-202ENST00000543982 MAPKAPK5-AS1Q8N8E1 139 aa10.8□□□□□ -0.68
XRCC1-202ENST00000543982 IGLV5-45A0A087WSX0 123 aa10.79□□□□□ -0.68
XRCC1-202ENST00000543982 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
XRCC1-202ENST00000543982 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
XRCC1-202ENST00000543982 COX6A2Q02221 97 aa10.79□□□□□ -0.68
XRCC1-202ENST00000543982 KLK12Q9UKR0 248 aa10.79□□□□□ -0.68
XRCC1-202ENST00000543982 MYMXA0A1B0GTQ4 84 aa10.78□□□□□ -0.68
XRCC1-202ENST00000543982 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
XRCC1-202ENST00000543982 LEPROTO15243 131 aa10.77□□□□□ -0.68
XRCC1-202ENST00000543982 ENHOQ6UWT2 76 aa10.77□□□□□ -0.68
XRCC1-202ENST00000543982 H3BRM9 83 aa10.77□□□□□ -0.69
XRCC1-202ENST00000543982 J3QQQ9 107 aa10.77□□□□□ -0.69
XRCC1-202ENST00000543982 EREGO14944 169 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 DNAH10OSP0CZ25 163 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 CASC10Q5T4H9 136 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 UPK3BQ9BT76 320 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 IGHV3-64A0A075B6Q5 118 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 IGHV1-58A0A0C4DH39 117 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 TSPEAR-AS2P59090 65 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 LBHQ53QV2 105 aaPredicted RBP10.76□□□□□ -0.69
XRCC1-202ENST00000543982 PLEKHB2Q96CS7 222 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 Q9H8V8 135 aa10.76□□□□□ -0.69
XRCC1-202ENST00000543982 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
XRCC1-202ENST00000543982 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
XRCC1-202ENST00000543982 HINT1P49773 126 aaPredicted RBP10.74□□□□□ -0.69
XRCC1-202ENST00000543982 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 PRR34Q9NV39 138 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 IGLV10-54A0A075B6I4 117 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 REG3AQ06141 175 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 BATFQ16520 125 aa10.74□□□□□ -0.69
XRCC1-202ENST00000543982 UBE2DNLQ8IWF7 75 aa10.72□□□□□ -0.69
XRCC1-202ENST00000543982 UBE2WQ96B02 151 aa10.72□□□□□ -0.69
XRCC1-202ENST00000543982 CCL25O15444 150 aa10.72□□□□□ -0.69
XRCC1-202ENST00000543982 HSD52Q0P140 79 aa10.72□□□□□ -0.69
XRCC1-202ENST00000543982 SS18Q15532 418 aa10.71□□□□□ -0.69
XRCC1-202ENST00000543982 BVES-AS1Q5T3Y7 98 aa10.71□□□□□ -0.69
XRCC1-202ENST00000543982 SCGB1D4Q6XE38 83 aa10.71□□□□□ -0.69
XRCC1-202ENST00000543982 IGHV3OR16-9A0A0B4J2B5 98 aa10.7□□□□□ -0.7
XRCC1-202ENST00000543982 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
XRCC1-202ENST00000543982 SMIM1B2RUZ4 78 aa10.7□□□□□ -0.7
XRCC1-202ENST00000543982 XCL1P47992 114 aa10.7□□□□□ -0.7
XRCC1-202ENST00000543982 KRTAP26-1Q6PEX3 210 aa10.68□□□□□ -0.7
XRCC1-202ENST00000543982 CHCHD10Q8WYQ3 142 aaPredicted RBP10.68□□□□□ -0.7
XRCC1-202ENST00000543982 A0A087WZ39 114 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 IBA57-AS1B1ANH7 110 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 C3orf84H3BNL1 204 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 TAL2Q16559 108 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 COL5A1-AS1Q5SY13 56 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 C5orf38Q86SI9 138 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
XRCC1-202ENST00000543982 Q9HAA7 133 aa10.66□□□□□ -0.7
XRCC1-202ENST00000543982 FOXI1Q12951 378 aa10.66□□□□□ -0.7
XRCC1-202ENST00000543982 C10orf126Q8N4M7 172 aa10.66□□□□□ -0.7
XRCC1-202ENST00000543982 HIST1H4GQ99525 98 aa10.66□□□□□ -0.7
XRCC1-202ENST00000543982 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
XRCC1-202ENST00000543982 ORAOV1Q8WV07 137 aa10.65□□□□□ -0.7
XRCC1-202ENST00000543982 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
XRCC1-202ENST00000543982 GAGE12HA6NDE8 117 aa10.65□□□□□ -0.71
XRCC1-202ENST00000543982 CRPP02741 224 aa10.64□□□□□ -0.71
XRCC1-202ENST00000543982 GCSHP23434 173 aa10.64□□□□□ -0.71
XRCC1-202ENST00000543982 CD164L2Q6UWJ8 174 aa10.64□□□□□ -0.71
XRCC1-202ENST00000543982 CEND1Q8N111 149 aa10.64□□□□□ -0.71
XRCC1-202ENST00000543982 TM2D2Q9BX73 214 aa10.64□□□□□ -0.71
XRCC1-202ENST00000543982 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
XRCC1-202ENST00000543982 M0R2N4 97 aa10.63□□□□□ -0.71
XRCC1-202ENST00000543982 NDUFA1O15239 70 aa10.63□□□□□ -0.71
XRCC1-202ENST00000543982 SPANXB1Q9NS25 103 aaPredicted RBP10.63□□□□□ -0.71
XRCC1-202ENST00000543982 SRSF9Q13242 221 aaKnown RBP eCLIP10.63□□□□□ -0.71
XRCC1-202ENST00000543982 MIAQ16674 131 aa10.63□□□□□ -0.71
XRCC1-202ENST00000543982 LINC01561Q8N1V8 128 aa10.63□□□□□ -0.71
XRCC1-202ENST00000543982 LY6G6CO95867 125 aa10.62□□□□□ -0.71
XRCC1-202ENST00000543982 ALMS1Q8TCU4 4167 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 LINC00476Q8WZB0 136 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 FXYD2P54710 66 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
XRCC1-202ENST00000543982 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
XRCC1-202ENST00000543982 A6NDN8 102 aa10.6□□□□□ -0.71
XRCC1-202ENST00000543982 TMEM238C9JI98 176 aa10.6□□□□□ -0.71
XRCC1-202ENST00000543982 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
XRCC1-202ENST00000543982 COX7A2LO14548 114 aa10.59□□□□□ -0.71
XRCC1-202ENST00000543982 PTTG1IPP53801 180 aa10.59□□□□□ -0.71
XRCC1-202ENST00000543982 TOMM7Q9P0U1 55 aa10.59□□□□□ -0.71
XRCC1-202ENST00000543982 K7EP13 123 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms