RNA–Protein interactions for RNA: ENST00000543604.1

AC053513.1-201, humanhuman

TSL 3 BASIC

Gene AC053513.1, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC053513.1-201ENST00000543604 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 TNFRSF6BO95407 300 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 RAB4AP20338 218 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 RAB5AP20339 215 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 COX6A2Q02221 97 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 REG3AQ06141 175 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 MAJINQ3KP22 176 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 COX19Q49B96 90 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 FAM104BQ5XKR9 115 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 SMIM15Q7Z3B0 74 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 AMN1Q8IY45 258 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
AC053513.1-201ENST00000543604 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 RPS10P46783 165 aaKnown RBP4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 ZNF56Q15929 161 aa4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 STPG4Q8N801 248 aa4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 NEXN-AS1Q8NBZ9 246 aa4.96□□□□□ -1.62
AC053513.1-201ENST00000543604 IGKV2-24A0A0C4DH68 120 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 APCSP02743 223 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 MT-ND6P03923 174 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 MGPP08493 103 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 FABP9Q0Z7S8 132 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 GAGE6Q13070 117 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 MRPL51Q4U2R6 128 aaKnown RBP4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 Q6ZRP5 223 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 TRAPPC1Q9Y5R8 145 aa4.95□□□□□ -1.62
AC053513.1-201ENST00000543604 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 IGHV1-24A0A0C4DH33 117 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 M0QY20 66 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 TRGC2P03986 189 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 SRSF9Q13242 221 aaKnown RBP eCLIP4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 IQCJQ1A5X6 159 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 KIAA1644Q3SXP7 199 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 NTM-AS1Q6ZSK4 140 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 MRAP2Q96G30 205 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 PKIGQ9Y2B9 76 aa4.94□□□□□ -1.62
AC053513.1-201ENST00000543604 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 IFITM10A6NMD0 228 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 D6R8Y8 96 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 SMKR1H3BMG3 65 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 H7C1H1 209 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 PPBPP02775 128 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 CKS2P33552 79 aa4.93□□□□□ -1.62
AC053513.1-201ENST00000543604 NCR2O95944 276 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 ORMDL3Q8N138 153 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 ZNF664Q8N3J9 261 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 C20orf203Q8NBC4 194 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 RPL39LQ96EH5 51 aaKnown RBP4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 PRELID3AQ96N28 172 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 ALKBH7Q9BT30 221 aaPredicted RBP4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 NIT2Q9NQR4 276 aa4.92□□□□□ -1.62
AC053513.1-201ENST00000543604 NPYP01303 97 aa4.91□□□□□ -1.62
AC053513.1-201ENST00000543604 TMEM243Q9BU79 118 aa4.91□□□□□ -1.62
AC053513.1-201ENST00000543604 PSORS1C2Q9UIG4 136 aa4.91□□□□□ -1.62
AC053513.1-201ENST00000543604 IGLV4-60A0A075B6I1 120 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 TRBV6-5A0A0K0K1A5 114 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 UBE2L6O14933 153 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 PPP1R17O96001 155 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 PCP4P48539 62 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 HIGD2BQ4VC39 106 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 C15orf56Q8N910 161 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 ST20Q9HBF5 79 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 LAMTOR2Q9Y2Q5 125 aa4.9□□□□□ -1.63
AC053513.1-201ENST00000543604 A0A096LNI7 61 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 GVQW2A0A096LPI5 108 aaPredicted RBP4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 LOC389332A0A1B0GUA5 103 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 C1orf196B1AJZ1 125 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 C18orf32Q8TCD1 76 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
AC053513.1-201ENST00000543604 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
AC053513.1-201ENST00000543604 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
AC053513.1-201ENST00000543604 VCYO14598 125 aa4.88□□□□□ -1.63
AC053513.1-201ENST00000543604 RPL32P62910 135 aaKnown RBP4.88□□□□□ -1.63
AC053513.1-201ENST00000543604 MAP1LC3AQ9H492 121 aa4.88□□□□□ -1.63
AC053513.1-201ENST00000543604 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 PRSS2P07478 247 aa4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 PMCHP20382 165 aa4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 Q8N8P6 123 aa4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 SMIM2Q9BVW6 85 aa4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
AC053513.1-201ENST00000543604 IGKV3OR2-268A0A0C4DH90 116 aa4.86□□□□□ -1.63
AC053513.1-201ENST00000543604 LINC01546A6NGU7 62 aa4.86□□□□□ -1.63
AC053513.1-201ENST00000543604 I3L3M4 83 aa4.86□□□□□ -1.63
AC053513.1-201ENST00000543604 TSHBP01222 138 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms