RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 MIAQ16674 131 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 ETDBQ3ZM63 59 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 TIMM17BO60830 172 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 INSL3P51460 131 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 SH2D6Q7Z4S9 175 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
MSH2-206ENST00000543555 TRBV20-1A0A075B6N2 111 aa9.81□□□□□ -0.84
MSH2-206ENST00000543555 H7C423 109 aa9.81□□□□□ -0.84
MSH2-206ENST00000543555 TCL1BO95988 128 aa9.81□□□□□ -0.84
MSH2-206ENST00000543555 SMIM1B2RUZ4 78 aa9.81□□□□□ -0.84
MSH2-206ENST00000543555 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
MSH2-206ENST00000543555 PCP4P48539 62 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 C9orf66Q5T8R8 295 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 NBEAL2Q6ZNJ1 2754 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 LINC00612Q8N6U2 182 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
MSH2-206ENST00000543555 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
MSH2-206ENST00000543555 H7C2G1 150 aa9.79□□□□□ -0.84
MSH2-206ENST00000543555 X6R8D5 127 aa9.79□□□□□ -0.84
MSH2-206ENST00000543555 Q9H8V8 135 aa9.79□□□□□ -0.84
MSH2-206ENST00000543555 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
MSH2-206ENST00000543555 F5H768 121 aa9.78□□□□□ -0.84
MSH2-206ENST00000543555 NPC2P61916 151 aa9.78□□□□□ -0.84
MSH2-206ENST00000543555 GAGE6Q13070 117 aa9.78□□□□□ -0.84
MSH2-206ENST00000543555 IFITM1P13164 125 aa9.77□□□□□ -0.84
MSH2-206ENST00000543555 Q1RN00 199 aa9.77□□□□□ -0.84
MSH2-206ENST00000543555 RNF183Q96D59 192 aa9.77□□□□□ -0.84
MSH2-206ENST00000543555 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
MSH2-206ENST00000543555 MGAM2Q2M2H8 2515 aa9.77□□□□□ -0.85
MSH2-206ENST00000543555 SMIM9A6NGZ8 99 aa9.77□□□□□ -0.85
MSH2-206ENST00000543555 C3orf56Q8N813 242 aa9.77□□□□□ -0.85
MSH2-206ENST00000543555 J3QR89 54 aa9.76□□□□□ -0.85
MSH2-206ENST00000543555 DAND5Q8N907 189 aa9.76□□□□□ -0.85
MSH2-206ENST00000543555 CHCHD5Q9BSY4 110 aa9.75□□□□□ -0.85
MSH2-206ENST00000543555 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
MSH2-206ENST00000543555 ZNF625Q96I27 306 aaPredicted RBP9.75□□□□□ -0.85
MSH2-206ENST00000543555 MDFIQ99750 246 aa9.75□□□□□ -0.85
MSH2-206ENST00000543555 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
MSH2-206ENST00000543555 NBEAL1Q6ZS30 2694 aa9.74□□□□□ -0.85
MSH2-206ENST00000543555 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
MSH2-206ENST00000543555 C21orf62-AS1Q17RA5 79 aa9.74□□□□□ -0.85
MSH2-206ENST00000543555 CITED1Q99966 193 aa9.74□□□□□ -0.85
MSH2-206ENST00000543555 GYPEP15421 78 aa9.73□□□□□ -0.85
MSH2-206ENST00000543555 TRIAP1O43715 76 aa9.73□□□□□ -0.85
MSH2-206ENST00000543555 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 HERV-K104P63124 156 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 FOXI1Q12951 378 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
MSH2-206ENST00000543555 A0A0U1RRA0 63 aa9.71□□□□□ -0.85
MSH2-206ENST00000543555 LYRM9A8MSI8 78 aa9.71□□□□□ -0.85
MSH2-206ENST00000543555 DEFB135Q30KP9 77 aa9.71□□□□□ -0.85
MSH2-206ENST00000543555 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.85
MSH2-206ENST00000543555 TEN1Q86WV5 123 aa9.71□□□□□ -0.86
MSH2-206ENST00000543555 APOC4P55056 127 aa9.7□□□□□ -0.86
MSH2-206ENST00000543555 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
MSH2-206ENST00000543555 C9JAW5 83 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 RPL13AP40429 203 aaKnown RBP9.69□□□□□ -0.86
MSH2-206ENST00000543555 COPS9Q8WXC6 57 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 SLC25A20O43772 301 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 COX7B2Q8TF08 81 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 ANK2Q01484 3957 aa9.69□□□□□ -0.86
MSH2-206ENST00000543555 OXLD1Q5BKU9 147 aa9.68□□□□□ -0.86
MSH2-206ENST00000543555 M0QXV9 152 aa9.68□□□□□ -0.86
MSH2-206ENST00000543555 DEFB4AO15263 64 aa9.68□□□□□ -0.86
MSH2-206ENST00000543555 LINC01620Q4KN68 170 aa9.68□□□□□ -0.86
MSH2-206ENST00000543555 PPDPFLQ8WWR9 84 aa9.68□□□□□ -0.86
MSH2-206ENST00000543555 IGHV4-28A0A0C4DH34 117 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 GAGE12HA6NDE8 117 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 PAX4O43316 350 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 COX6CP09669 75 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 ANKRD29Q8N6D5 301 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 CARD19Q96LW7 228 aa9.67□□□□□ -0.86
MSH2-206ENST00000543555 LINC00959A0A1B0GUT2 108 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 SPATA25Q9BR10 227 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 TOMM7Q9P0U1 55 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 DNHD1Q96M86 4753 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 A0A087WZ39 114 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 A0A1B0GUV1 79 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 TMEM262E9PQX1 116 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 WFDC9Q8NEX5 89 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 A0A096LPF7 62 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 PPDPFQ9H3Y8 114 aa9.66□□□□□ -0.86
MSH2-206ENST00000543555 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 Q8NAQ8 132 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 DAD1P61803 113 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 WIPF1O43516 503 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 MIFP14174 115 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
MSH2-206ENST00000543555 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
MSH2-206ENST00000543555 PRB2P02812 416 aaPredicted RBP9.63□□□□□ -0.87
MSH2-206ENST00000543555 SIGMAR1Q99720 223 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms