RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 EPPK1P58107 5090 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 IGLV4-60A0A075B6I1 120 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 A0A096LNJ9 63 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 F8W1H4 67 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 RPL39P62891 51 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 ERASQ7Z444 233 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 KIR2DL4Q99706 377 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-210ENST00000542817 A0A1B0GUV1 79 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 A0A1B0GV72 72 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 H3BUT2 72 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 M0R2N4 97 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 TM2D2Q9BX73 214 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 SPCS1Q9Y6A9 102 aa7.18□□□□□ -1.26
NPIPB3-210ENST00000542817 H7C423 109 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 HBDP02042 147 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 FCER1GP30273 86 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 LAGE3Q14657 143 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 PRR34Q9NV39 138 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
NPIPB3-210ENST00000542817 IBA57-AS1B1ANH7 110 aa7.16□□□□□ -1.26
NPIPB3-210ENST00000542817 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
NPIPB3-210ENST00000542817 K7EMI3 77 aa7.16□□□□□ -1.26
NPIPB3-210ENST00000542817 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
NPIPB3-210ENST00000542817 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-210ENST00000542817 IGIPA6NJ69 53 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 IFI27L1Q96BM0 104 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 OPRPNQ99935 248 aaPredicted RBP7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 KLK12Q9UKR0 248 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.26
NPIPB3-210ENST00000542817 A0A087WX48 190 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 E9PLD3 99 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 KRTAP26-1Q6PEX3 210 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 C2orf66Q6UXQ4 117 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 LINC00269Q8N2A0 174 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 TOMM6Q96B49 74 aa7.14□□□□□ -1.27
NPIPB3-210ENST00000542817 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 GAGE12HA6NDE8 117 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 UBE2L6O14933 153 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 RTL8CO15255 209 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 ATP5LO75964 103 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 VCX2Q9H322 139 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
NPIPB3-210ENST00000542817 IGLV4-3A0A075B6K6 122 aa7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 TTC32Q5I0X7 151 aa7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 Q6ZUT4 128 aa7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 C10orf126Q8N4M7 172 aa7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
NPIPB3-210ENST00000542817 A0A1B0GWB2 263 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 ANGP03950 147 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 RNASE13Q5GAN3 156 aaKnown RBP7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 CLPSL2Q6UWE3 100 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 CEND1Q8N111 149 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 UBE2WQ96B02 151 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 CYSLTR1Q9Y271 337 aa7.11□□□□□ -1.27
NPIPB3-210ENST00000542817 REG3AQ06141 175 aa7.1□□□□□ -1.27
NPIPB3-210ENST00000542817 C6orf223Q8N319 242 aa7.1□□□□□ -1.27
NPIPB3-210ENST00000542817 AMELXQ99217 191 aa7.1□□□□□ -1.27
NPIPB3-210ENST00000542817 RPL24P83731 157 aaKnown RBP7.09□□□□□ -1.27
NPIPB3-210ENST00000542817 ODF1Q14990 250 aa7.09□□□□□ -1.27
NPIPB3-210ENST00000542817 TIMM17AQ99595 171 aa7.09□□□□□ -1.27
NPIPB3-210ENST00000542817 Q9HAA7 133 aa7.09□□□□□ -1.27
NPIPB3-210ENST00000542817 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 H0Y8G0 127 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 IGKCP01834 107 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 C1orf134Q5TEV5 83 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 CHAC1Q9BUX1 264 aa7.08□□□□□ -1.28
NPIPB3-210ENST00000542817 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 DPM2O94777 84 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 FXYD2P54710 66 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 WFDC2Q14508 124 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 MIAQ16674 131 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 RAB37Q96AX2 223 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 TMEM141Q96I45 108 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 SCGB3A1Q96QR1 104 aa7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 APOBP04114 4563 aaKnown RBP7.07□□□□□ -1.28
NPIPB3-210ENST00000542817 IGLV10-54A0A075B6I4 117 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 GCSHP23434 173 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 NMUP48645 174 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
NPIPB3-210ENST00000542817 BAALCQ8WXS3 180 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms