RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
YBX3-212ENST00000542002 YPEL4Q96NS1 127 aa6.22□□□□□ -1.41
YBX3-212ENST00000542002 IGHV3OR16-9A0A0B4J2B5 98 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 CHTF8P0CG12 524 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 COX6A2Q02221 97 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 SVBPQ8N300 66 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
YBX3-212ENST00000542002 NXT2Q9NPJ8 142 aaKnown RBP6.21□□□□□ -1.42
YBX3-212ENST00000542002 AP5S1Q9NUS5 200 aa6.21□□□□□ -1.42
YBX3-212ENST00000542002 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
YBX3-212ENST00000542002 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 COX7A2LO14548 114 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 SNAPINO95295 136 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
YBX3-212ENST00000542002 FABP9Q0Z7S8 132 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
YBX3-212ENST00000542002 ORMDL2Q53FV1 153 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 PRSS3P2Q8NHM4 247 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
YBX3-212ENST00000542002 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.19□□□□□ -1.42
YBX3-212ENST00000542002 IFITM10A6NMD0 228 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 FAM229AH3BQW9 127 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 K7EMI3 77 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 TOMM6Q96B49 74 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 TMEM141Q96I45 108 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 AMELXQ99217 191 aa6.19□□□□□ -1.42
YBX3-212ENST00000542002 INAFM2P0DMQ5 153 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 MALP21145 153 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 UBE2D1P51668 147 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 COX19Q49B96 90 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 TRAPPC1Q9Y5R8 145 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
YBX3-212ENST00000542002 ZNF561-AS1K7EIQ3 104 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 MT-ND6P03923 174 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 NDUFA5Q16718 116 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 Q6ZRU5 148 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 SPACA4Q8TDM5 124 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 VCX2Q9H322 139 aa6.17□□□□□ -1.42
YBX3-212ENST00000542002 A0A087WYN8 130 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 A0A087WZ39 114 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 A0A096LNI7 61 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 TEX43Q6ZNM6 134 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 CARD19Q96LW7 228 aa6.16□□□□□ -1.42
YBX3-212ENST00000542002 A0A096LNJ9 63 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 IGKV2-24A0A0C4DH68 120 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 A0A0J9YXV3 536 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 NPSP0C0P6 89 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 KIAA0087Q14695 138 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 ERASQ7Z444 233 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 C18orf32Q8TCD1 76 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 DPH3Q96FX2 82 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 TIMM17AQ99595 171 aa6.15□□□□□ -1.42
YBX3-212ENST00000542002 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 SPAG11BQ08648 103 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 MAJINQ3KP22 176 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
YBX3-212ENST00000542002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
YBX3-212ENST00000542002 APOMO95445 188 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 PLA2G1BP04054 148 aaKnown RBP6.13□□□□□ -1.43
YBX3-212ENST00000542002 LINC00614P0C842 121 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 G0S2P27469 103 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 HNRNPA3P51991 378 aaKnown RBP6.13□□□□□ -1.43
YBX3-212ENST00000542002 PMCHL1Q16048 86 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 Q6ZN92 141 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 CAMK2N2Q96S95 79 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 C2orf88Q9BSF0 95 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 HERC1Q15751 4861 aa6.13□□□□□ -1.43
YBX3-212ENST00000542002 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
YBX3-212ENST00000542002 STPG4Q8N801 248 aa6.12□□□□□ -1.43
YBX3-212ENST00000542002 SMCO4Q9NRQ5 59 aa6.12□□□□□ -1.43
YBX3-212ENST00000542002 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
YBX3-212ENST00000542002 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
YBX3-212ENST00000542002 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
YBX3-212ENST00000542002 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
YBX3-212ENST00000542002 GAGE2BQ13066 116 aa6.11□□□□□ -1.43
YBX3-212ENST00000542002 MRPL35Q9NZE8 188 aaKnown RBP6.11□□□□□ -1.43
YBX3-212ENST00000542002 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
YBX3-212ENST00000542002 FAT3Q8TDW7 4589 aa6.11□□□□□ -1.43
YBX3-212ENST00000542002 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
YBX3-212ENST00000542002 COLCA2A8K830 154 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms