RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 K7EMI3 77 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 COX7A2LO14548 114 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 MALP21145 153 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 SDIM1Q6ZPB5 146 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 SLC7A5P1Q8MH63 180 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 LINC00526Q96FQ7 95 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 TMEM141Q96I45 108 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 CHAC1Q9BUX1 264 aa5.95□□□□□ -1.46
SNHG1-215ENST00000540904 Q5VSD8 79 aa5.94□□□□□ -1.46
SNHG1-215ENST00000540904 Q6ZN92 141 aa5.94□□□□□ -1.46
SNHG1-215ENST00000540904 TRAPPC1Q9Y5R8 145 aa5.94□□□□□ -1.46
SNHG1-215ENST00000540904 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
SNHG1-215ENST00000540904 G0S2P27469 103 aa5.93□□□□□ -1.46
SNHG1-215ENST00000540904 TEX43Q6ZNM6 134 aa5.93□□□□□ -1.46
SNHG1-215ENST00000540904 CIRBP-AS1Q8TBR5 109 aa5.93□□□□□ -1.46
SNHG1-215ENST00000540904 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-215ENST00000540904 RYR1P21817 5038 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 IGHV3OR16-9A0A0B4J2B5 98 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 IGIPA6NJ69 53 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 PANO1I0J062 215 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 ZC2HC1BQ5TFG8 222 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 FA2HQ7L5A8 372 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 TOMM6Q96B49 74 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 C2orf88Q9BSF0 95 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 VCX2Q9H322 139 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 SMCO4Q9NRQ5 59 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 HSPG2P98160 4391 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
SNHG1-215ENST00000540904 IGLV4-69A0A075B6H9 119 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 LINC01546A6NGU7 62 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 A6NJY4 79 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 APOMO95445 188 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 NPSP0C0P6 89 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 CHTF8P0CG12 524 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 UBE2D1P51668 147 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 COX6A2Q02221 97 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 SYCNQ0VAF6 134 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 CBLN2Q8IUK8 224 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 CARD19Q96LW7 228 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 SCGB3A1Q96QR1 104 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 AMELXQ99217 191 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
SNHG1-215ENST00000540904 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 PAPPA-AS1Q5QFB9 102 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 ERASQ7Z444 233 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 ORAOV1Q8WV07 137 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 CAMK2N2Q96S95 79 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 TIMM17AQ99595 171 aa5.9□□□□□ -1.46
SNHG1-215ENST00000540904 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.47
SNHG1-215ENST00000540904 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
SNHG1-215ENST00000540904 OR10D4PQ8NGN7 298 aa5.89□□□□□ -1.47
SNHG1-215ENST00000540904 C18orf32Q8TCD1 76 aa5.89□□□□□ -1.47
SNHG1-215ENST00000540904 SPACA4Q8TDM5 124 aa5.89□□□□□ -1.47
SNHG1-215ENST00000540904 A0A087WZ39 114 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 PLA2G1BP04054 148 aaKnown RBP5.88□□□□□ -1.47
SNHG1-215ENST00000540904 LINC00614P0C842 121 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 CIRBPQ14011 172 aaKnown RBP5.88□□□□□ -1.47
SNHG1-215ENST00000540904 MAJINQ3KP22 176 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 Q6ZRU5 148 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 C2orf48Q96LS8 159 aa5.88□□□□□ -1.47
SNHG1-215ENST00000540904 A0A087WYN8 130 aa5.87□□□□□ -1.47
SNHG1-215ENST00000540904 A0A096LNI7 61 aa5.87□□□□□ -1.47
SNHG1-215ENST00000540904 INAFM2P0DMQ5 153 aa5.87□□□□□ -1.47
SNHG1-215ENST00000540904 PMCHL1Q16048 86 aa5.87□□□□□ -1.47
SNHG1-215ENST00000540904 URB1-AS1Q96HZ7 61 aa5.87□□□□□ -1.47
SNHG1-215ENST00000540904 GEMIN7Q9H840 131 aaKnown RBP5.87□□□□□ -1.47
SNHG1-215ENST00000540904 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 RAB5BP61020 215 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 HERVK_113P63121 156 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 SEC11AP67812 179 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 PKIGQ9Y2B9 76 aa5.86□□□□□ -1.47
SNHG1-215ENST00000540904 A0A096LNJ9 63 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 LOC107984640A0A0U1RRK4 108 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-215ENST00000540904 NDUFA1O15239 70 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 GAGE2BQ13066 116 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 UNQ6190/PRO20217Q6UXQ8 127 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 FAM19A3Q7Z5A8 133 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 LINC01561Q8N1V8 128 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 STPG4Q8N801 248 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 CST9LQ9H4G1 147 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 LINC00474Q9P2X8 69 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
SNHG1-215ENST00000540904 F8WDY8 70 aa5.84□□□□□ -1.47
SNHG1-215ENST00000540904 HBDP02042 147 aa5.84□□□□□ -1.47
SNHG1-215ENST00000540904 TRGC2P03986 189 aa5.84□□□□□ -1.47
SNHG1-215ENST00000540904 PRSS2P07478 247 aa5.84□□□□□ -1.47
SNHG1-215ENST00000540904 PTTG1IPP53801 180 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms