RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
CYB561A3-216ENST00000540755 ESRGQ1W209 222 aa9.75□□□□□ -0.85
CYB561A3-216ENST00000540755 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
CYB561A3-216ENST00000540755 PCP2Q8IVA1 136 aa9.75□□□□□ -0.85
CYB561A3-216ENST00000540755 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
CYB561A3-216ENST00000540755 TRAV13-1A0A0B4J241 112 aa9.74□□□□□ -0.85
CYB561A3-216ENST00000540755 MYMXA0A1B0GTQ4 84 aa9.74□□□□□ -0.85
CYB561A3-216ENST00000540755 HERVK_113P63121 156 aa9.74□□□□□ -0.85
CYB561A3-216ENST00000540755 GEMIN7Q9H840 131 aaKnown RBP9.74□□□□□ -0.85
CYB561A3-216ENST00000540755 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
CYB561A3-216ENST00000540755 HINT1P49773 126 aaPredicted RBP9.73□□□□□ -0.85
CYB561A3-216ENST00000540755 BVES-AS1Q5T3Y7 98 aa9.73□□□□□ -0.85
CYB561A3-216ENST00000540755 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
CYB561A3-216ENST00000540755 TCTAP57738 103 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 BATFQ16520 125 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 ALMS1Q8TCU4 4167 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 A6NDN8 102 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 IGLL5B9A064 214 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 LEPROTO15243 131 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 CCL25O15444 150 aa9.72□□□□□ -0.85
CYB561A3-216ENST00000540755 H3BRM9 83 aa9.71□□□□□ -0.86
CYB561A3-216ENST00000540755 LINC00469Q8N7U9 141 aa9.71□□□□□ -0.86
CYB561A3-216ENST00000540755 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
CYB561A3-216ENST00000540755 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 COX6A2Q02221 97 aa9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 Q8N3U1 123 aa9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 CDKN2A-AS1Q9UH64 79 aa9.7□□□□□ -0.86
CYB561A3-216ENST00000540755 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
CYB561A3-216ENST00000540755 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
CYB561A3-216ENST00000540755 SS18Q15532 418 aa9.69□□□□□ -0.86
CYB561A3-216ENST00000540755 LINC00269Q8N2A0 174 aa9.69□□□□□ -0.86
CYB561A3-216ENST00000540755 MAPKAPK5-AS1Q8N8E1 139 aa9.69□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 ZNF815PA8K554 130 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 J3QQQ9 107 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 CCL18P55774 89 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 REG3AQ06141 175 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 TM2D2Q9BX73 214 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 TP73-AS1Q9UF72 201 aa9.68□□□□□ -0.86
CYB561A3-216ENST00000540755 NUPR2A6NF83 97 aa9.67□□□□□ -0.86
CYB561A3-216ENST00000540755 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
CYB561A3-216ENST00000540755 PRR34Q9NV39 138 aa9.67□□□□□ -0.86
CYB561A3-216ENST00000540755 LINC00588Q9Y4M8 146 aa9.67□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 A0A1B0GV90 55 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3-30P01768 117 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3-33P01772 117 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3-30-5P0DP03 117 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 CLPSL2Q6UWE3 100 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 TTTY13Q9BZ97 58 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 SCGB1D4Q6XE38 83 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 UPK3BQ9BT76 320 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 APLNQ9ULZ1 77 aa9.66□□□□□ -0.86
CYB561A3-216ENST00000540755 IGHV3-64A0A075B6Q5 118 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 TRAV8-3A0A0A6YYJ7 113 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 CEND1Q8N111 149 aa9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 KLK5Q9Y337 293 aaPredicted RBP9.65□□□□□ -0.87
CYB561A3-216ENST00000540755 A0A087WZ39 114 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 IGLV5-39A0A0G2JS06 123 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 TMEM238LA0A1B0GVL6 79 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 A6NJY4 79 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 HIST1H4GQ99525 98 aa9.64□□□□□ -0.87
CYB561A3-216ENST00000540755 CRPP02741 224 aa9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 XCL1P47992 114 aa9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 CHCHD10Q8WYQ3 142 aaPredicted RBP9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 COX11Q9Y6N1 276 aa9.63□□□□□ -0.87
CYB561A3-216ENST00000540755 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
CYB561A3-216ENST00000540755 Q6ZVH6 145 aa9.62□□□□□ -0.87
CYB561A3-216ENST00000540755 SMIM13P0DJ93 91 aa9.61□□□□□ -0.87
CYB561A3-216ENST00000540755 GCSHP23434 173 aa9.61□□□□□ -0.87
CYB561A3-216ENST00000540755 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
CYB561A3-216ENST00000540755 MIAQ16674 131 aa9.61□□□□□ -0.87
CYB561A3-216ENST00000540755 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
CYB561A3-216ENST00000540755 SRSF9Q13242 221 aaKnown RBP eCLIP9.6□□□□□ -0.87
CYB561A3-216ENST00000540755 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
CYB561A3-216ENST00000540755 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
CYB561A3-216ENST00000540755 IGLV10-54A0A075B6I4 117 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 TAX1BP3O14907 124 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 TIMM17BO60830 172 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 FOXI1Q12951 378 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 LINC00476Q8WZB0 136 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 NDUFA12Q9UI09 145 aa9.59□□□□□ -0.87
CYB561A3-216ENST00000540755 COX7A2LO14548 114 aa9.58□□□□□ -0.88
CYB561A3-216ENST00000540755 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
CYB561A3-216ENST00000540755 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
CYB561A3-216ENST00000540755 A0A1B0GWB2 263 aa9.57□□□□□ -0.88
CYB561A3-216ENST00000540755 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms