RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 LINC01356Q8N9X3 169 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 PRORYQ9H606 182 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 LRRK2Q5S007 2527 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 CACNA1AO00555 2505 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 ATP5G1P05496 136 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 HIST2H2BCQ6DN03 193 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
SCNN1A-215ENST00000540037 IGSF10Q6WRI0 2623 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 NAV2Q8IVL1 2488 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 K7EQD1 137 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 RPL36AP83881 106 aaKnown RBP9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 DEFB114Q30KQ6 69 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 RPL36ALQ969Q0 106 aaKnown RBP9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 MALP21145 153 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
SCNN1A-215ENST00000540037 PLA2G2AP14555 144 aa9.86□□□□□ -0.83
SCNN1A-215ENST00000540037 Q6YL49 198 aa9.86□□□□□ -0.83
SCNN1A-215ENST00000540037 C14orf132Q9NPU4 83 aa9.86□□□□□ -0.83
SCNN1A-215ENST00000540037 C3orf22Q8N5N4 141 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 FAM19A3Q7Z5A8 133 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 SND1-IT1Q9HBX3 110 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 NOP10Q9NPE3 64 aaKnown RBP9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 CRPP02741 224 aa9.85□□□□□ -0.83
SCNN1A-215ENST00000540037 A0A096LNT2 108 aa9.84□□□□□ -0.83
SCNN1A-215ENST00000540037 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
SCNN1A-215ENST00000540037 CSDC2Q9Y534 153 aaKnown RBP9.84□□□□□ -0.83
SCNN1A-215ENST00000540037 SLPIP03973 132 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 RPL28P46779 137 aaKnown RBP9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 C5orf38Q86SI9 138 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 STHQ8IWL8 128 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 COPS9Q8WXC6 57 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 A0A1W2PRX2 142 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 UBE2L6O14933 153 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 PFN2P35080 140 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 LINC00158P58513 81 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 CYSTM1Q9H1C7 97 aa9.83□□□□□ -0.84
SCNN1A-215ENST00000540037 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
SCNN1A-215ENST00000540037 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
SCNN1A-215ENST00000540037 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
SCNN1A-215ENST00000540037 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
SCNN1A-215ENST00000540037 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
SCNN1A-215ENST00000540037 ZFYVE26Q68DK2 2539 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 A0A087WVE0 104 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 CCL18P55774 89 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 CR1P17927 2039 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 UQCRQO14949 82 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 TMEM243Q9BU79 118 aa9.81□□□□□ -0.84
SCNN1A-215ENST00000540037 NCR3O14931 201 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 INAFM2P0DMQ5 153 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 LECT2O14960 151 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 DNAL4O96015 105 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 C4orf3Q8WVX3 66 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 LINC00526Q96FQ7 95 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 LINC00846Q9NV44 126 aa9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
SCNN1A-215ENST00000540037 TRBV10-1A0A0K0K1A3 114 aa9.79□□□□□ -0.84
SCNN1A-215ENST00000540037 NBEAL2Q6ZNJ1 2754 aa9.79□□□□□ -0.84
SCNN1A-215ENST00000540037 PIEZO1Q92508 2521 aa9.78□□□□□ -0.84
SCNN1A-215ENST00000540037 TRGV2A0A075B6R0 118 aa9.78□□□□□ -0.84
SCNN1A-215ENST00000540037 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
SCNN1A-215ENST00000540037 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
SCNN1A-215ENST00000540037 COX7CP15954 63 aa9.77□□□□□ -0.84
SCNN1A-215ENST00000540037 CXCL5P42830 114 aa9.77□□□□□ -0.84
SCNN1A-215ENST00000540037 FSHBP01225 129 aa9.77□□□□□ -0.85
SCNN1A-215ENST00000540037 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.85
SCNN1A-215ENST00000540037 CCDC168Q8NDH2 2452 aa9.77□□□□□ -0.85
SCNN1A-215ENST00000540037 PAX4O43316 350 aa9.77□□□□□ -0.85
SCNN1A-215ENST00000540037 J3QLI3 93 aa9.76□□□□□ -0.85
SCNN1A-215ENST00000540037 PF4P02776 101 aa9.76□□□□□ -0.85
SCNN1A-215ENST00000540037 GIG44P09565 113 aaPredicted RBP9.76□□□□□ -0.85
SCNN1A-215ENST00000540037 IGHV4-31P0DP07 118 aa9.76□□□□□ -0.85
SCNN1A-215ENST00000540037 PLAC8L1A1L4L8 177 aa9.76□□□□□ -0.85
SCNN1A-215ENST00000540037 IGHV3OR16-9A0A0B4J2B5 98 aa9.75□□□□□ -0.85
SCNN1A-215ENST00000540037 HIST1H4AP62805 103 aaKnown RBP9.75□□□□□ -0.85
SCNN1A-215ENST00000540037 RPL35AP18077 110 aaKnown RBP9.75□□□□□ -0.85
SCNN1A-215ENST00000540037 DSCR9P59020 149 aa9.75□□□□□ -0.85
SCNN1A-215ENST00000540037 PRR3P79522 188 aaKnown RBP9.74□□□□□ -0.85
SCNN1A-215ENST00000540037 A0A1B0GX51 115 aa9.73□□□□□ -0.85
SCNN1A-215ENST00000540037 KRTAP10-9P60411 292 aa9.73□□□□□ -0.85
SCNN1A-215ENST00000540037 SS18Q15532 418 aa9.73□□□□□ -0.85
SCNN1A-215ENST00000540037 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
SCNN1A-215ENST00000540037 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 TRGV4A0A0C4DH28 118 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 LINC01561Q8N1V8 128 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 CLPSL2Q6UWE3 100 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 WFDC9Q8NEX5 89 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 OBSCN-AS1Q96MR7 158 aa9.72□□□□□ -0.85
SCNN1A-215ENST00000540037 APCP25054 2843 aa9.71□□□□□ -0.85
SCNN1A-215ENST00000540037 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.85
SCNN1A-215ENST00000540037 ATOX1O00244 68 aa9.71□□□□□ -0.86
SCNN1A-215ENST00000540037 KIR2DL5BQ8NHK3 375 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms