RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 X6R8D5 127 aa12.15□□□□□ -0.46
PCDHB17P-201ENST00000539533 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.15□□□□□ -0.46
PCDHB17P-201ENST00000539533 DEFB135Q30KP9 77 aa12.15□□□□□ -0.46
PCDHB17P-201ENST00000539533 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
PCDHB17P-201ENST00000539533 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
PCDHB17P-201ENST00000539533 Q1RN00 199 aa12.14□□□□□ -0.47
PCDHB17P-201ENST00000539533 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
PCDHB17P-201ENST00000539533 APOC4P55056 127 aa12.14□□□□□ -0.47
PCDHB17P-201ENST00000539533 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
PCDHB17P-201ENST00000539533 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
PCDHB17P-201ENST00000539533 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
PCDHB17P-201ENST00000539533 ATXN8Q156A1 80 aa12.13□□□□□ -0.47
PCDHB17P-201ENST00000539533 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
PCDHB17P-201ENST00000539533 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
PCDHB17P-201ENST00000539533 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
PCDHB17P-201ENST00000539533 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
PCDHB17P-201ENST00000539533 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
PCDHB17P-201ENST00000539533 EGFEM1PQ0D2K5 195 aa12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 Q6Q795 121 aa12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 LITAFQ99732 161 aa12.11□□□□□ -0.47
PCDHB17P-201ENST00000539533 SMIM20Q8N5G0 67 aa12.1□□□□□ -0.47
PCDHB17P-201ENST00000539533 ANK2Q01484 3957 aa12.1□□□□□ -0.47
PCDHB17P-201ENST00000539533 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
PCDHB17P-201ENST00000539533 HERV-K104P63124 156 aa12.09□□□□□ -0.47
PCDHB17P-201ENST00000539533 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 CFAP161Q6P656 301 aa12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 CEMP1Q6PRD7 247 aaPredicted RBP12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 UBE2WQ96B02 151 aa12.08□□□□□ -0.47
PCDHB17P-201ENST00000539533 TRBV30A0A0K0K1B3 111 aa12.08□□□□□ -0.48
PCDHB17P-201ENST00000539533 DEFB4AO15263 64 aa12.08□□□□□ -0.48
PCDHB17P-201ENST00000539533 TRIAP1O43715 76 aa12.08□□□□□ -0.48
PCDHB17P-201ENST00000539533 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
PCDHB17P-201ENST00000539533 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
PCDHB17P-201ENST00000539533 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
PCDHB17P-201ENST00000539533 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
PCDHB17P-201ENST00000539533 PRSS2P07478 247 aa12.07□□□□□ -0.48
PCDHB17P-201ENST00000539533 RNASE13Q5GAN3 156 aaKnown RBP12.07□□□□□ -0.48
PCDHB17P-201ENST00000539533 DNAJC30Q96LL9 226 aa12.07□□□□□ -0.48
PCDHB17P-201ENST00000539533 ADAMTSL4-AS1Q5T5F5 129 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 NDUFA12Q9UI09 145 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 K7EQD1 137 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 SPANXCQ9NY87 97 aa12.06□□□□□ -0.48
PCDHB17P-201ENST00000539533 C2orf82Q6UX34 121 aa12.05□□□□□ -0.48
PCDHB17P-201ENST00000539533 MDFIQ99750 246 aa12.05□□□□□ -0.48
PCDHB17P-201ENST00000539533 NOTCH1P46531 2555 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 IGHV4-28A0A0C4DH34 117 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 TINCRA0A1B0GVN0 87 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 LINC00612Q8N6U2 182 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 FHL2Q14192 279 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 MIAQ16674 131 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 FAM222AQ5U5X8 452 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 ICOSQ9Y6W8 199 aa12.04□□□□□ -0.48
PCDHB17P-201ENST00000539533 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
PCDHB17P-201ENST00000539533 A8MZ25 164 aa12.03□□□□□ -0.48
PCDHB17P-201ENST00000539533 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
PCDHB17P-201ENST00000539533 UBE2D4Q9Y2X8 147 aa12.03□□□□□ -0.48
PCDHB17P-201ENST00000539533 DNAH3Q8TD57 4116 aa12.03□□□□□ -0.48
PCDHB17P-201ENST00000539533 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
PCDHB17P-201ENST00000539533 LOC100131303A0A0U1RQF7 123 aa12.02□□□□□ -0.49
PCDHB17P-201ENST00000539533 MEIG1Q5JSS6 88 aa12.02□□□□□ -0.49
PCDHB17P-201ENST00000539533 Q8NAQ8 132 aa12.02□□□□□ -0.49
PCDHB17P-201ENST00000539533 H7C423 109 aa12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 RPL36AP83881 106 aaKnown RBP12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 RPL36ALQ969Q0 106 aaKnown RBP12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 IGKV2-29A2NJV5 120 aaPredicted RBP12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 NPC2P61916 151 aa12.01□□□□□ -0.49
PCDHB17P-201ENST00000539533 MIFP14174 115 aa12□□□□□ -0.49
PCDHB17P-201ENST00000539533 NBEAL1Q6ZS30 2694 aa12□□□□□ -0.49
PCDHB17P-201ENST00000539533 LYRM9A8MSI8 78 aa11.99□□□□□ -0.49
PCDHB17P-201ENST00000539533 COX6CP09669 75 aa11.99□□□□□ -0.49
PCDHB17P-201ENST00000539533 MRPL23Q16540 153 aaKnown RBP11.99□□□□□ -0.49
PCDHB17P-201ENST00000539533 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
PCDHB17P-201ENST00000539533 H3BT86 120 aa11.98□□□□□ -0.49
PCDHB17P-201ENST00000539533 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
PCDHB17P-201ENST00000539533 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
PCDHB17P-201ENST00000539533 RETNQ9HD89 108 aa11.98□□□□□ -0.49
PCDHB17P-201ENST00000539533 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
PCDHB17P-201ENST00000539533 TIMM17BO60830 172 aa11.97□□□□□ -0.49
PCDHB17P-201ENST00000539533 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.49
PCDHB17P-201ENST00000539533 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
PCDHB17P-201ENST00000539533 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
PCDHB17P-201ENST00000539533 CDKN2A-AS1Q9UH64 79 aa11.96□□□□□ -0.5
PCDHB17P-201ENST00000539533 LST1O00453 97 aa11.95□□□□□ -0.5
PCDHB17P-201ENST00000539533 DAD1P61803 113 aa11.94□□□□□ -0.5
PCDHB17P-201ENST00000539533 DAND5Q8N907 189 aa11.94□□□□□ -0.5
PCDHB17P-201ENST00000539533 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
PCDHB17P-201ENST00000539533 MGAM2Q2M2H8 2515 aa11.94□□□□□ -0.5
PCDHB17P-201ENST00000539533 NDUFA1O15239 70 aa11.93□□□□□ -0.5
PCDHB17P-201ENST00000539533 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms