RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 KRTAP17-1Q9BYP8 105 aa5.92□□□□□ -1.46
SFSWAP-202ENST00000535202 Q9H8V8 135 aa5.92□□□□□ -1.46
SFSWAP-202ENST00000535202 A0A096LPF7 62 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 LOC389332A0A1B0GUA5 103 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 RBAKDNA6NC62 111 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 F8VRH5 84 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 H3BNG1 76 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 H7C1H1 209 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 MED14OSP0DP75 135 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 ZNF415Q09FC8 603 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 MAPKAPK5-AS1Q8N8E1 139 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 VSIG2Q96IQ7 327 aa5.91□□□□□ -1.46
SFSWAP-202ENST00000535202 TRAV8-4A0A0B4J246 113 aa5.9□□□□□ -1.46
SFSWAP-202ENST00000535202 TRAV4A0A0B4J268 109 aa5.9□□□□□ -1.46
SFSWAP-202ENST00000535202 AMN1Q8IY45 258 aa5.9□□□□□ -1.46
SFSWAP-202ENST00000535202 UPK3BQ9BT76 320 aa5.9□□□□□ -1.46
SFSWAP-202ENST00000535202 TPPP3Q9BW30 176 aa5.9□□□□□ -1.46
SFSWAP-202ENST00000535202 MUC4Q99102 2169 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 UQCRQO14949 82 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 PAX4O43316 350 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 SLC25A20O43772 301 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 TCL1BO95988 128 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 ACYP1P07311 99 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 IGLC6P0CF74 106 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 LYZL1Q6UWQ5 148 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 GOLT1AQ6ZVE7 132 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 PRNTQ86SH4 94 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 KRTAP1-5Q9BYS1 174 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 PPDPFQ9H3Y8 114 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 LENEPQ9Y5L5 61 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 ICOSQ9Y6W8 199 aa5.89□□□□□ -1.47
SFSWAP-202ENST00000535202 TRGV11A0A075B6L2 103 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 C16orf90A8MZG2 172 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 LAGE3Q14657 143 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 TMEM170BQ5T4T1 132 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 BAALCQ8WXS3 180 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 LINC00526Q96FQ7 95 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 TMEM101Q96IK0 257 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 C8orf49Q96NF6 230 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 KIR2DL4Q99706 377 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 PRO0255Q9UI72 69 aa5.88□□□□□ -1.47
SFSWAP-202ENST00000535202 TRAV8-1A0A0A6YYK1 113 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 TRGV4A0A0C4DH28 118 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 H3BT86 120 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 FHL2Q14192 279 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 ATXN8Q156A1 80 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 RNF185Q96GF1 192 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 SGK494Q96LW2 274 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 PRO1854Q9UHT4 67 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 RYR1P21817 5038 aa5.87□□□□□ -1.47
SFSWAP-202ENST00000535202 TRAV21A0A0B4J279 112 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 TRBV10-2A0A0K0K1G8 114 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 GNRH2O43555 120 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 NXPH4O95158 308 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 CRIP1P50238 77 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 HERVK_113P61574 105 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
SFSWAP-202ENST00000535202 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 IGHV3-16A0A0C4DH30 117 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 C9JAW5 83 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 SH2D1AO60880 128 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 CXCL5P42830 114 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 LINC00315P59091 139 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 SRSF9Q13242 221 aaKnown RBP eCLIP5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 LYPD5Q6UWN5 251 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 PRADC1Q9BSG0 188 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
SFSWAP-202ENST00000535202 HSPG2P98160 4391 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 ZNF815PA8K554 130 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 K7EQD1 137 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 GYPEP15421 78 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 LINC01620Q4KN68 170 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 SLC25A29Q8N8R3 303 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 TOMM6Q96B49 74 aa5.84□□□□□ -1.47
SFSWAP-202ENST00000535202 TRBV30A0A0K0K1B3 111 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 H3BVH4 76 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 IGHV3-30P01768 117 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 ORM1P02763 201 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 CFC1BP0CG36 223 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 CFC1P0CG37 223 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 LINC00694P0DN24 101 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 IGHV3-30-5P0DP03 117 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 CRYGAP11844 174 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 ZNF80P51504 273 aaPredicted RBP5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 SCGB1D4Q6XE38 83 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 NEXN-AS1Q8NBZ9 246 aa5.83□□□□□ -1.48
SFSWAP-202ENST00000535202 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms