RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 KPRPQ5T749 579 aaPredicted RBP5.94□□□□□ -1.46
CTNND1-231ENST00000532463 PROK1P58294 105 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 MRGPRG-AS1Q2M3A8 158 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 PCNX1Q96RV3 2341 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 ZFP36P26651 326 aaKnown RBP5.93□□□□□ -1.46
CTNND1-231ENST00000532463 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 Q8N7P7 452 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 POLR2KP53803 58 aaKnown RBP5.93□□□□□ -1.46
CTNND1-231ENST00000532463 DEFB116Q30KQ4 102 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 SMIM29Q86T20 159 aa5.93□□□□□ -1.46
CTNND1-231ENST00000532463 FSHBP01225 129 aa5.92□□□□□ -1.46
CTNND1-231ENST00000532463 CYP4F30PQ9H0H9 118 aa5.92□□□□□ -1.46
CTNND1-231ENST00000532463 C11orf1Q9H5F2 150 aa5.92□□□□□ -1.46
CTNND1-231ENST00000532463 CDC42SE2Q9NRR3 84 aa5.92□□□□□ -1.46
CTNND1-231ENST00000532463 DENND4AQ7Z401 1863 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 UNQ6190/PRO20217Q6UXQ8 127 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 SORL1Q92673 2214 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 M0R2N4 97 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 VWA8A3KMH1 1905 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 ODF3BA8MYP8 253 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 CRIP1P50238 77 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 C2orf48Q96LS8 159 aa5.91□□□□□ -1.46
CTNND1-231ENST00000532463 RLFQ13129 1914 aa5.9□□□□□ -1.46
CTNND1-231ENST00000532463 CHCHD7Q9BUK0 85 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 IGLV8-61A0A075B6I0 122 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 NUPR2A6NF83 97 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 C6orf223Q8N319 242 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 IGLV2-14P01704 120 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 LINC00242Q5T6M2 205 aa5.9□□□□□ -1.47
CTNND1-231ENST00000532463 GPR179Q6PRD1 2367 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 F8WDY8 70 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 MED13Q9UHV7 2174 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 RIF1Q5UIP0 2472 aaKnown RBP5.89□□□□□ -1.47
CTNND1-231ENST00000532463 KRTAP27-1Q3LI81 207 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 SMIM1B2RUZ4 78 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 UQCR11O14957 56 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 LCA10Q71F78 164 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 ARHGAP32A7KAX9 2087 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 FSTL3O95633 263 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 LINC01600Q96MT4 127 aa5.89□□□□□ -1.47
CTNND1-231ENST00000532463 GRNP28799 593 aaKnown RBP5.88□□□□□ -1.47
CTNND1-231ENST00000532463 SIP14410 1827 aa5.88□□□□□ -1.47
CTNND1-231ENST00000532463 IGIPA6NJ69 53 aa5.88□□□□□ -1.47
CTNND1-231ENST00000532463 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
CTNND1-231ENST00000532463 LINC01556Q5JQF7 62 aa5.88□□□□□ -1.47
CTNND1-231ENST00000532463 PLXNA3P51805 1871 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 U3KQA8 63 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 EDN2P20800 178 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 LY6G6CO95867 125 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 Q8N2B8 174 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
CTNND1-231ENST00000532463 PRR14LQ5THK1 2151 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 C9orf116Q5BN46 136 aaPredicted RBP5.86□□□□□ -1.47
CTNND1-231ENST00000532463 Q6ZSV7 163 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 DOPEY1Q5JWR5 2465 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 PLXNA4Q9HCM2 1894 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 A0A1B0GW54 56 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 PRR3P79522 188 aaKnown RBP5.86□□□□□ -1.47
CTNND1-231ENST00000532463 PLXNB1O43157 2135 aa5.86□□□□□ -1.47
CTNND1-231ENST00000532463 FREM1Q5H8C1 2179 aa5.85□□□□□ -1.47
CTNND1-231ENST00000532463 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
CTNND1-231ENST00000532463 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
CTNND1-231ENST00000532463 KLLNB2CW77 178 aa5.84□□□□□ -1.47
CTNND1-231ENST00000532463 NCKAP5O14513 1909 aa5.84□□□□□ -1.47
CTNND1-231ENST00000532463 IGLV5-52A0A0A0MRZ9 124 aa5.84□□□□□ -1.47
CTNND1-231ENST00000532463 IGLV2-11P01706 119 aa5.84□□□□□ -1.47
CTNND1-231ENST00000532463 NAV3Q8IVL0 2385 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 A8MUN3 132 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 Q6YL49 198 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 WDR81Q562E7 1941 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 TSC2P49815 1807 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 CNFNQ9BYD5 112 aa5.83□□□□□ -1.48
CTNND1-231ENST00000532463 MUC4Q99102 2169 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 ZNF295-AS1Q8N0V1 137 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 SPATA3Q8NHX4 192 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 TSPEAR-AS2P59090 65 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 MIR22HGQ0VDD5 57 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 LINC00574Q9H8X3 128 aa5.82□□□□□ -1.48
CTNND1-231ENST00000532463 Q6ZPA2 131 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 OTOGLQ3ZCN5 2332 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 PLA2G2CQ5R387 149 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 ZSWIM8A7E2V4 1837 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 PLXNA2O75051 1894 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 C19orf84I3L1E1 186 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 SMCR5Q8TEV8 140 aa5.81□□□□□ -1.48
CTNND1-231ENST00000532463 COX6A2Q02221 97 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 LINC01561Q8N1V8 128 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 MGAMO43451 1857 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 OBSL1O75147 1896 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 NLRC5Q86WI3 1866 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 BRWD1-AS2P59051 145 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 PRR9Q5T870 116 aa5.8□□□□□ -1.48
CTNND1-231ENST00000532463 GAS8-AS1O95177 125 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms