RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
SRPRA-205ENST00000531104 SPINK8P0C7L1 97 aa7.49□□□□□ -1.21
SRPRA-205ENST00000531104 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
SRPRA-205ENST00000531104 CEND1Q8N111 149 aa7.49□□□□□ -1.21
SRPRA-205ENST00000531104 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
SRPRA-205ENST00000531104 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
SRPRA-205ENST00000531104 DEFB131BA0A096LNP1 70 aa7.48□□□□□ -1.21
SRPRA-205ENST00000531104 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
SRPRA-205ENST00000531104 CCL25O15444 150 aa7.48□□□□□ -1.21
SRPRA-205ENST00000531104 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
SRPRA-205ENST00000531104 C10orf126Q8N4M7 172 aa7.47□□□□□ -1.21
SRPRA-205ENST00000531104 MRAPQ8TCY5 172 aa7.47□□□□□ -1.21
SRPRA-205ENST00000531104 TRAV10A0A0B4J240 114 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 A0A0J9YXY3 114 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 A6NJY4 79 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 LCE2BO14633 110 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 TAX1BP3O14907 124 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 NDUFA1O15239 70 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 FXYD2P54710 66 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 LINC01561Q8N1V8 128 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 B9D2Q9BPU9 175 aa7.46□□□□□ -1.22
SRPRA-205ENST00000531104 A0A087WZ39 114 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 A6NDN8 102 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 GCSHP23434 173 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 Q8N3U1 123 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 LITAFQ99732 161 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
SRPRA-205ENST00000531104 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 K7EP13 123 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 TIMM17BO60830 172 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 IGHV3-30P01768 117 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 IGHV3-30-5P0DP03 117 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 SS18Q15532 418 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 ESRGQ1W209 222 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 KRTAP21-3Q3LHN1 58 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 PRR34Q9NV39 138 aa7.44□□□□□ -1.22
SRPRA-205ENST00000531104 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
SRPRA-205ENST00000531104 LINC00269Q8N2A0 174 aa7.43□□□□□ -1.22
SRPRA-205ENST00000531104 ZNF625Q96I27 306 aaPredicted RBP7.43□□□□□ -1.22
SRPRA-205ENST00000531104 COX11Q9Y6N1 276 aa7.43□□□□□ -1.22
SRPRA-205ENST00000531104 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
SRPRA-205ENST00000531104 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
SRPRA-205ENST00000531104 REG3AQ06141 175 aa7.42□□□□□ -1.22
SRPRA-205ENST00000531104 C15orf53Q8NAA6 179 aa7.42□□□□□ -1.22
SRPRA-205ENST00000531104 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
SRPRA-205ENST00000531104 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
SRPRA-205ENST00000531104 TMEM238C9JI98 176 aa7.41□□□□□ -1.22
SRPRA-205ENST00000531104 SRSF9Q13242 221 aaKnown RBP eCLIP7.41□□□□□ -1.22
SRPRA-205ENST00000531104 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
SRPRA-205ENST00000531104 Q6ZVH6 145 aa7.41□□□□□ -1.22
SRPRA-205ENST00000531104 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
SRPRA-205ENST00000531104 TENM3Q9P273 2699 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 SMIM13P0DJ93 91 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 PTTG1IPP53801 180 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 HERV-K104P63124 156 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 FOXI1Q12951 378 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 ADAMTSL4-AS1Q5T5F5 129 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 ENHOQ6UWT2 76 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 C5orf38Q86SI9 138 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 WFDC10BQ8IUB3 73 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 CHCHD10Q8WYQ3 142 aaPredicted RBP7.4□□□□□ -1.22
SRPRA-205ENST00000531104 Q9H8V8 135 aa7.4□□□□□ -1.22
SRPRA-205ENST00000531104 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
SRPRA-205ENST00000531104 NHLRC4P0CG21 123 aaPredicted RBP7.39□□□□□ -1.23
SRPRA-205ENST00000531104 XCL1P47992 114 aa7.39□□□□□ -1.23
SRPRA-205ENST00000531104 NHP2Q9NX24 153 aaKnown RBP7.39□□□□□ -1.23
SRPRA-205ENST00000531104 KLK12Q9UKR0 248 aa7.39□□□□□ -1.23
SRPRA-205ENST00000531104 TMEM238LA0A1B0GVL6 79 aa7.38□□□□□ -1.23
SRPRA-205ENST00000531104 MIAQ16674 131 aa7.38□□□□□ -1.23
SRPRA-205ENST00000531104 LINC01556Q5JQF7 62 aa7.38□□□□□ -1.23
SRPRA-205ENST00000531104 MUSTN1Q8IVN3 82 aa7.38□□□□□ -1.23
SRPRA-205ENST00000531104 PPDPFQ9H3Y8 114 aa7.38□□□□□ -1.23
SRPRA-205ENST00000531104 NOTCH1P46531 2555 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 TRAV8-4A0A0B4J246 113 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 K7ERJ3 54 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 COX7A2LO14548 114 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 IGHV3-33P01772 117 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 IFITM1P13164 125 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 KIAA0087Q14695 138 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 KRTAP26-1Q6PEX3 210 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 Q8IZM0 81 aa7.37□□□□□ -1.23
SRPRA-205ENST00000531104 NBEAL1Q6ZS30 2694 aa7.36□□□□□ -1.23
SRPRA-205ENST00000531104 DNAH10OSP0CZ25 163 aa7.36□□□□□ -1.23
SRPRA-205ENST00000531104 SFTA2Q6UW10 78 aa7.36□□□□□ -1.23
SRPRA-205ENST00000531104 KLK5Q9Y337 293 aaPredicted RBP7.36□□□□□ -1.23
SRPRA-205ENST00000531104 LINC00588Q9Y4M8 146 aa7.36□□□□□ -1.23
SRPRA-205ENST00000531104 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 IGLV10-54A0A075B6I4 117 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 A4D1N5 150 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 GAGE12HA6NDE8 117 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 IGLL5B9A064 214 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
SRPRA-205ENST00000531104 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 CFC1P0CG37 223 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 RPL24P83731 157 aaKnown RBP7.35□□□□□ -1.23
SRPRA-205ENST00000531104 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
SRPRA-205ENST00000531104 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms