RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 HSBP1O75506 76 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 PRSS1P07477 247 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 C14orf177Q52M58 125 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 FAM19A2Q8N3H0 131 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 NTN5Q8WTR8 489 aaPredicted RBP13.94□□□□□ -0.18
CAPN1-220ENST00000530567 PGPEP1Q9NXJ5 209 aa13.94□□□□□ -0.18
CAPN1-220ENST00000530567 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-220ENST00000530567 CDPF1Q6NVV7 123 aa13.93□□□□□ -0.18
CAPN1-220ENST00000530567 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
CAPN1-220ENST00000530567 COX6A2Q02221 97 aa13.92□□□□□ -0.18
CAPN1-220ENST00000530567 C16orf90A8MZG2 172 aa13.91□□□□□ -0.18
CAPN1-220ENST00000530567 COX7A2LO14548 114 aa13.91□□□□□ -0.18
CAPN1-220ENST00000530567 C5orf38Q86SI9 138 aa13.91□□□□□ -0.18
CAPN1-220ENST00000530567 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
CAPN1-220ENST00000530567 ATP5LO75964 103 aa13.9□□□□□ -0.18
CAPN1-220ENST00000530567 LRP1BQ9NZR2 4599 aa13.9□□□□□ -0.18
CAPN1-220ENST00000530567 GVQW2A0A096LPI5 108 aaPredicted RBP13.9□□□□□ -0.19
CAPN1-220ENST00000530567 IGLV5-52A0A0A0MRZ9 124 aa13.9□□□□□ -0.19
CAPN1-220ENST00000530567 PMVKQ15126 192 aa13.9□□□□□ -0.19
CAPN1-220ENST00000530567 CFAP161Q6P656 301 aa13.9□□□□□ -0.19
CAPN1-220ENST00000530567 BIRC6Q9NR09 4857 aa13.89□□□□□ -0.19
CAPN1-220ENST00000530567 IGHV1-58A0A0C4DH39 117 aa13.89□□□□□ -0.19
CAPN1-220ENST00000530567 hDV102S1A0JD36 115 aa13.89□□□□□ -0.19
CAPN1-220ENST00000530567 HIGD2BQ4VC39 106 aa13.89□□□□□ -0.19
CAPN1-220ENST00000530567 A0A0J9YXV3 536 aa13.88□□□□□ -0.19
CAPN1-220ENST00000530567 SLPIP03973 132 aa13.87□□□□□ -0.19
CAPN1-220ENST00000530567 A0A087WZ39 114 aa13.86□□□□□ -0.19
CAPN1-220ENST00000530567 MALP21145 153 aa13.86□□□□□ -0.19
CAPN1-220ENST00000530567 COA6Q5JTJ3 125 aaKnown RBP13.86□□□□□ -0.19
CAPN1-220ENST00000530567 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
CAPN1-220ENST00000530567 KRTAP10-1P60331 282 aa13.84□□□□□ -0.19
CAPN1-220ENST00000530567 CNBPP62633 177 aaKnown RBP13.84□□□□□ -0.19
CAPN1-220ENST00000530567 HERVK_113P63121 156 aa13.84□□□□□ -0.19
CAPN1-220ENST00000530567 SEC11AP67812 179 aa13.84□□□□□ -0.19
CAPN1-220ENST00000530567 IGHV3-64A0A075B6Q5 118 aa13.83□□□□□ -0.2
CAPN1-220ENST00000530567 TINCRA0A1B0GVN0 87 aa13.83□□□□□ -0.2
CAPN1-220ENST00000530567 GCSHP23434 173 aa13.83□□□□□ -0.2
CAPN1-220ENST00000530567 NDUFA6P56556 154 aa13.83□□□□□ -0.2
CAPN1-220ENST00000530567 LINC00526Q96FQ7 95 aa13.83□□□□□ -0.2
CAPN1-220ENST00000530567 IGLV4-69A0A075B6H9 119 aa13.82□□□□□ -0.2
CAPN1-220ENST00000530567 IGLV5-45A0A087WSX0 123 aa13.82□□□□□ -0.2
CAPN1-220ENST00000530567 LEPROTL1O95214 131 aa13.82□□□□□ -0.2
CAPN1-220ENST00000530567 LINC01620Q4KN68 170 aa13.82□□□□□ -0.2
CAPN1-220ENST00000530567 GEMIN7Q9H840 131 aaKnown RBP13.82□□□□□ -0.2
CAPN1-220ENST00000530567 CDKN2A-AS1Q9UH64 79 aa13.82□□□□□ -0.2
CAPN1-220ENST00000530567 APOMO95445 188 aa13.81□□□□□ -0.2
CAPN1-220ENST00000530567 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
CAPN1-220ENST00000530567 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
CAPN1-220ENST00000530567 SPAG11BQ08648 103 aa13.8□□□□□ -0.2
CAPN1-220ENST00000530567 OR10D4PQ8NGN7 298 aa13.8□□□□□ -0.2
CAPN1-220ENST00000530567 ORAOV1Q8WV07 137 aa13.8□□□□□ -0.2
CAPN1-220ENST00000530567 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
CAPN1-220ENST00000530567 FABP4P15090 132 aa13.79□□□□□ -0.2
CAPN1-220ENST00000530567 LINC00469Q8N7U9 141 aa13.79□□□□□ -0.2
CAPN1-220ENST00000530567 C9orf163Q8N9P6 203 aa13.79□□□□□ -0.2
CAPN1-220ENST00000530567 ZNF561-AS1K7EIQ3 104 aa13.78□□□□□ -0.2
CAPN1-220ENST00000530567 CHAC1Q9BUX1 264 aa13.78□□□□□ -0.2
CAPN1-220ENST00000530567 HSPB8Q9UJY1 196 aa13.78□□□□□ -0.2
CAPN1-220ENST00000530567 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
CAPN1-220ENST00000530567 KIAA0087Q14695 138 aa13.76□□□□□ -0.21
CAPN1-220ENST00000530567 CHTOPQ9Y3Y2 248 aaKnown RBP13.76□□□□□ -0.21
CAPN1-220ENST00000530567 APOBP04114 4563 aaKnown RBP13.76□□□□□ -0.21
CAPN1-220ENST00000530567 DNAH8Q96JB1 4490 aa13.76□□□□□ -0.21
CAPN1-220ENST00000530567 SMIM1B2RUZ4 78 aa13.75□□□□□ -0.21
CAPN1-220ENST00000530567 C2orf48Q96LS8 159 aa13.75□□□□□ -0.21
CAPN1-220ENST00000530567 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-220ENST00000530567 ZNF22P17026 224 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-220ENST00000530567 ODF1Q14990 250 aa13.74□□□□□ -0.21
CAPN1-220ENST00000530567 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-220ENST00000530567 MRPL35Q9NZE8 188 aaKnown RBP13.74□□□□□ -0.21
CAPN1-220ENST00000530567 F8VRH5 84 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 SYCNQ0VAF6 134 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 CARD19Q96LW7 228 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 KIAA1109Q2LD37 5005 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 Q6ZRU5 148 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 Q6ZSA8 131 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 FAM30AQ9NZY2 134 aa13.73□□□□□ -0.21
CAPN1-220ENST00000530567 H0Y8G0 127 aa13.72□□□□□ -0.21
CAPN1-220ENST00000530567 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
CAPN1-220ENST00000530567 SDIM1Q6ZPB5 146 aa13.72□□□□□ -0.21
CAPN1-220ENST00000530567 CAMK2N2Q96S95 79 aa13.72□□□□□ -0.21
CAPN1-220ENST00000530567 F8WDY8 70 aa13.69□□□□□ -0.22
CAPN1-220ENST00000530567 H3BRM9 83 aa13.69□□□□□ -0.22
CAPN1-220ENST00000530567 C10orf25Q5T742 122 aa13.69□□□□□ -0.22
CAPN1-220ENST00000530567 Q8IZM0 81 aa13.69□□□□□ -0.22
CAPN1-220ENST00000530567 MAP1LC3CQ9BXW4 147 aa13.69□□□□□ -0.22
CAPN1-220ENST00000530567 CDK2AP2O75956 126 aa13.68□□□□□ -0.22
CAPN1-220ENST00000530567 TOMM7Q9P0U1 55 aa13.68□□□□□ -0.22
CAPN1-220ENST00000530567 IGLV5-39A0A0G2JS06 123 aa13.67□□□□□ -0.22
CAPN1-220ENST00000530567 TMEM170BQ5T4T1 132 aa13.67□□□□□ -0.22
CAPN1-220ENST00000530567 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
CAPN1-220ENST00000530567 UNQ6190/PRO20217Q6UXQ8 127 aa13.67□□□□□ -0.22
CAPN1-220ENST00000530567 RYR1P21817 5038 aa13.66□□□□□ -0.22
CAPN1-220ENST00000530567 HSPG2P98160 4391 aa13.66□□□□□ -0.22
CAPN1-220ENST00000530567 NDUFA1O15239 70 aa13.66□□□□□ -0.22
CAPN1-220ENST00000530567 XGP55808 180 aa13.66□□□□□ -0.22
CAPN1-220ENST00000530567 SYS1-DBNDD2H3BUS1 97 aa13.65□□□□□ -0.22
CAPN1-220ENST00000530567 PANO1I0J062 215 aa13.65□□□□□ -0.22
CAPN1-220ENST00000530567 PRSS2P07478 247 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms