RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 RPL32P62910 135 aaKnown RBP7.05□□□□□ -1.28
SF3B2-208ENST00000529994 A0A096LNI7 61 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 IFITM2Q01629 132 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 SPINK6Q6UWN8 80 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 TIMM21Q9BVV7 248 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
SF3B2-208ENST00000529994 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
SF3B2-208ENST00000529994 IGLV4-69A0A075B6H9 119 aa7.03□□□□□ -1.28
SF3B2-208ENST00000529994 ADCYAP1P18509 176 aa7.03□□□□□ -1.28
SF3B2-208ENST00000529994 SYCNQ0VAF6 134 aa7.03□□□□□ -1.28
SF3B2-208ENST00000529994 KRTAP9-2Q9BYQ4 174 aa7.03□□□□□ -1.28
SF3B2-208ENST00000529994 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
SF3B2-208ENST00000529994 IFI27P40305 119 aaPredicted RBP7.02□□□□□ -1.29
SF3B2-208ENST00000529994 SPAG11BQ08648 103 aa7.02□□□□□ -1.29
SF3B2-208ENST00000529994 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
SF3B2-208ENST00000529994 TMEM218A2RU14 115 aa7.01□□□□□ -1.29
SF3B2-208ENST00000529994 APOMO95445 188 aa7.01□□□□□ -1.29
SF3B2-208ENST00000529994 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
SF3B2-208ENST00000529994 SRSF9Q13242 221 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B2-208ENST00000529994 COMMD7Q86VX2 200 aa7.01□□□□□ -1.29
SF3B2-208ENST00000529994 CTDSP1Q9GZU7 261 aa7.01□□□□□ -1.29
SF3B2-208ENST00000529994 KIAA1644Q3SXP7 199 aa7□□□□□ -1.29
SF3B2-208ENST00000529994 UQCC3Q6UW78 93 aa7□□□□□ -1.29
SF3B2-208ENST00000529994 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
SF3B2-208ENST00000529994 FAM104AQ969W3 186 aa7□□□□□ -1.29
SF3B2-208ENST00000529994 MUC2Q02817 5179 aa7□□□□□ -1.29
SF3B2-208ENST00000529994 MRPS36P82909 103 aaKnown RBP6.99□□□□□ -1.29
SF3B2-208ENST00000529994 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
SF3B2-208ENST00000529994 ZC2HC1BQ5TFG8 222 aa6.99□□□□□ -1.29
SF3B2-208ENST00000529994 Q8N8P6 123 aa6.99□□□□□ -1.29
SF3B2-208ENST00000529994 PKIGQ9Y2B9 76 aa6.99□□□□□ -1.29
SF3B2-208ENST00000529994 LAMTOR2Q9Y2Q5 125 aa6.99□□□□□ -1.29
SF3B2-208ENST00000529994 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 TGIF2-C20orf24A0A0A6YYL0 155 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 Q6ZRP5 223 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 CYSLTR1Q9Y271 337 aa6.98□□□□□ -1.29
SF3B2-208ENST00000529994 S100PP25815 95 aa6.97□□□□□ -1.29
SF3B2-208ENST00000529994 Q6ZN92 141 aa6.97□□□□□ -1.29
SF3B2-208ENST00000529994 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
SF3B2-208ENST00000529994 IMMP2LQ96T52 175 aa6.97□□□□□ -1.29
SF3B2-208ENST00000529994 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
SF3B2-208ENST00000529994 IGHV3OR16-9A0A0B4J2B5 98 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 PRSS47A8MTI9 375 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 PTTG1IPP53801 180 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 ORMDL2Q53FV1 153 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 OR10D4PQ8NGN7 298 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 C2orf88Q9BSF0 95 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 SEC11CQ9BY50 192 aa6.96□□□□□ -1.3
SF3B2-208ENST00000529994 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.95□□□□□ -1.3
SF3B2-208ENST00000529994 NXT2Q9NPJ8 142 aaKnown RBP6.95□□□□□ -1.3
SF3B2-208ENST00000529994 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
SF3B2-208ENST00000529994 NDUFA1O15239 70 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 UBE2D1P51668 147 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 VCX2Q9H322 139 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 RPS10P5Q9NQ39 176 aa6.94□□□□□ -1.3
SF3B2-208ENST00000529994 TRAV9-1A0A075B6T8 112 aa6.93□□□□□ -1.3
SF3B2-208ENST00000529994 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
SF3B2-208ENST00000529994 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
SF3B2-208ENST00000529994 A0A087WZ39 114 aa6.92□□□□□ -1.3
SF3B2-208ENST00000529994 A0A1W2PNN7 141 aa6.92□□□□□ -1.3
SF3B2-208ENST00000529994 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
SF3B2-208ENST00000529994 C2orf82Q6UX34 121 aa6.92□□□□□ -1.3
SF3B2-208ENST00000529994 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
SF3B2-208ENST00000529994 TOMM7Q9P0U1 55 aa6.92□□□□□ -1.3
SF3B2-208ENST00000529994 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 IGIPA6NJ69 53 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 FABP9Q0Z7S8 132 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 AMELXQ99217 191 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 GNB1LQ9BYB4 327 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
SF3B2-208ENST00000529994 MRPL35Q9NZE8 188 aaKnown RBP6.91□□□□□ -1.3
SF3B2-208ENST00000529994 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
SF3B2-208ENST00000529994 K7EMI3 77 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 PRSS2P07478 247 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 RHEBQ15382 184 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 RNF151Q2KHN1 245 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 LCE2DQ5TA82 110 aaPredicted RBP6.9□□□□□ -1.3
SF3B2-208ENST00000529994 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.3
SF3B2-208ENST00000529994 TOMM6Q96B49 74 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 SMCO4Q9NRQ5 59 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
SF3B2-208ENST00000529994 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 F8WDY8 70 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 APOC3P02656 99 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 MT-ND6P03923 174 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 G0S2P27469 103 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 PRR4Q16378 134 aa6.89□□□□□ -1.31
SF3B2-208ENST00000529994 PAPPA-AS1Q5QFB9 102 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms