RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
CTNND1-221ENST00000529873 M0R2N4 97 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
CTNND1-221ENST00000529873 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 CRIP2P52943 208 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-221ENST00000529873 LINC00208Q96KT6 92 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 C2orf91Q6ZV80 131 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
CTNND1-221ENST00000529873 CDC42SE2Q9NRR3 84 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 CDSNQ15517 529 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 COL5A1P20908 1838 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-221ENST00000529873 ACACAQ13085 2346 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 RPL37AP8A6NKH3 93 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 CNFNQ9BYD5 112 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 GVINP1Q7Z2Y8 2422 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 LY6G6CO95867 125 aa6.17□□□□□ -1.42
CTNND1-221ENST00000529873 ZNF73O43830 326 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-221ENST00000529873 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 CELA1Q9UNI1 258 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 NUPR2A6NF83 97 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 PSPHP1O15172 72 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 ATG2AQ2TAZ0 1938 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 PRM2P04554 102 aa6.16□□□□□ -1.42
CTNND1-221ENST00000529873 SPTAN1Q13813 2472 aaKnown RBP6.15□□□□□ -1.43
CTNND1-221ENST00000529873 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.43
CTNND1-221ENST00000529873 AVPP01185 164 aa6.15□□□□□ -1.43
CTNND1-221ENST00000529873 ESRGQ1W209 222 aa6.15□□□□□ -1.43
CTNND1-221ENST00000529873 GAS8-AS1O95177 125 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 C10orf25Q5T742 122 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 LIMD2Q9BT23 127 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 PCNX2A6NKB5 2137 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 BRI3O95415 125 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 NTM-AS1Q6ZSK4 140 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 CREBBPQ92793 2442 aa6.14□□□□□ -1.43
CTNND1-221ENST00000529873 COL6A6A6NMZ7 2263 aa6.13□□□□□ -1.43
CTNND1-221ENST00000529873 CYSRT1A8MQ03 144 aa6.13□□□□□ -1.43
CTNND1-221ENST00000529873 H3BS24 57 aa6.13□□□□□ -1.43
CTNND1-221ENST00000529873 ZNF580Q9UK33 172 aa6.13□□□□□ -1.43
CTNND1-221ENST00000529873 PCDH15Q96QU1 1955 aa6.13□□□□□ -1.43
CTNND1-221ENST00000529873 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 IGLV1-51P01701 117 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 POM121L12Q8N7R1 296 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 MDFIQ99750 246 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 RIF1Q5UIP0 2472 aaKnown RBP6.12□□□□□ -1.43
CTNND1-221ENST00000529873 DOCK7Q96N67 2140 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 ADAMTS20P59510 1910 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 hDV103S1A0JD37 113 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 CPAMD8Q8IZJ3 1885 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 SMR3AQ99954 134 aa6.12□□□□□ -1.43
CTNND1-221ENST00000529873 COX6A2Q02221 97 aa6.11□□□□□ -1.43
CTNND1-221ENST00000529873 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
CTNND1-221ENST00000529873 EGFEM1PQ0D2K5 195 aa6.11□□□□□ -1.43
CTNND1-221ENST00000529873 FHL2Q14192 279 aa6.11□□□□□ -1.43
CTNND1-221ENST00000529873 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
CTNND1-221ENST00000529873 CACNA1BQ00975 2339 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 X6R8D5 127 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
CTNND1-221ENST00000529873 CACNA1GO43497 2377 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 ATRXP46100 2492 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 KRTAP10-9P60411 292 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 ARHGAP21Q5T5U3 1957 aa6.1□□□□□ -1.43
CTNND1-221ENST00000529873 Q8N814 137 aa6.09□□□□□ -1.43
CTNND1-221ENST00000529873 GTF3C1Q12789 2109 aa6.09□□□□□ -1.43
CTNND1-221ENST00000529873 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
CTNND1-221ENST00000529873 COX8CQ7Z4L0 72 aa6.09□□□□□ -1.43
CTNND1-221ENST00000529873 LINC01561Q8N1V8 128 aa6.09□□□□□ -1.43
CTNND1-221ENST00000529873 IGLV5-52A0A0A0MRZ9 124 aa6.09□□□□□ -1.44
CTNND1-221ENST00000529873 H0Y9P7 68 aa6.09□□□□□ -1.44
CTNND1-221ENST00000529873 TRBV10-3A0A0K0K1G6 114 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-221ENST00000529873 Q8N3U1 123 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 ZGRF1Q86YA3 2104 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 C1orf137Q5JT78 98 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 RAI1Q7Z5J4 1906 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-221ENST00000529873 UNQ6190/PRO20217Q6UXQ8 127 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 ROS1P08922 2347 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 USF3Q68DE3 2245 aa6.08□□□□□ -1.44
CTNND1-221ENST00000529873 PCOTHQ58A44 107 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 AMELXQ99217 191 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 PKDREJQ9NTG1 2253 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 PLCE1Q9P212 2302 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 A0A087WYN8 130 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 KIAA1549Q9HCM3 1950 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 LCA10Q71F78 164 aa6.07□□□□□ -1.44
CTNND1-221ENST00000529873 SPINK1P00995 79 aa6.06□□□□□ -1.44
CTNND1-221ENST00000529873 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-221ENST00000529873 C6orf223Q8N319 242 aa6.06□□□□□ -1.44
CTNND1-221ENST00000529873 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
CTNND1-221ENST00000529873 A0A087WVE0 104 aa6.06□□□□□ -1.44
CTNND1-221ENST00000529873 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
CTNND1-221ENST00000529873 IGHV6-1A0A0B4J1U7 121 aa6.05□□□□□ -1.44
CTNND1-221ENST00000529873 A0A1B0GU69 56 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms