RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 GAGE2BQ13066 116 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 TEX43Q6ZNM6 134 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 ORAOV1Q8WV07 137 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 RPS10P5Q9NQ39 176 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
CAPN1-216ENST00000528739 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 TGIF2-C20orf24A0A0A6YYL0 155 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 Q6ZRU5 148 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
CAPN1-216ENST00000528739 PYGO1Q9Y3Y4 419 aa9.07□□□□□ -0.96
CAPN1-216ENST00000528739 VCX2Q9H322 139 aa9.06□□□□□ -0.96
CAPN1-216ENST00000528739 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
CAPN1-216ENST00000528739 LOC107984640A0A0U1RRK4 108 aa9.05□□□□□ -0.96
CAPN1-216ENST00000528739 G0S2P27469 103 aa9.05□□□□□ -0.96
CAPN1-216ENST00000528739 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
CAPN1-216ENST00000528739 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
CAPN1-216ENST00000528739 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
CAPN1-216ENST00000528739 K7EMI3 77 aa9.04□□□□□ -0.96
CAPN1-216ENST00000528739 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
CAPN1-216ENST00000528739 ZC2HC1BQ5TFG8 222 aa9.04□□□□□ -0.96
CAPN1-216ENST00000528739 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
CAPN1-216ENST00000528739 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
CAPN1-216ENST00000528739 A0A0J9YXV3 536 aa9.03□□□□□ -0.96
CAPN1-216ENST00000528739 FABP9Q0Z7S8 132 aa9.03□□□□□ -0.96
CAPN1-216ENST00000528739 RHEBQ15382 184 aa9.03□□□□□ -0.96
CAPN1-216ENST00000528739 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
CAPN1-216ENST00000528739 NDUFA1O15239 70 aa9.02□□□□□ -0.97
CAPN1-216ENST00000528739 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
CAPN1-216ENST00000528739 COX19Q49B96 90 aa9.02□□□□□ -0.97
CAPN1-216ENST00000528739 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
CAPN1-216ENST00000528739 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
CAPN1-216ENST00000528739 FLG2Q5D862 2391 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-216ENST00000528739 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-216ENST00000528739 APOC3P02656 99 aa9.01□□□□□ -0.97
CAPN1-216ENST00000528739 NDUFA5Q16718 116 aa9.01□□□□□ -0.97
CAPN1-216ENST00000528739 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
CAPN1-216ENST00000528739 SMCO4Q9NRQ5 59 aa9.01□□□□□ -0.97
CAPN1-216ENST00000528739 SRRM2Q9UQ35 2752 aaKnown RBP9.01□□□□□ -0.97
CAPN1-216ENST00000528739 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
CAPN1-216ENST00000528739 UBE2D1P51668 147 aa9□□□□□ -0.97
CAPN1-216ENST00000528739 HNRNPA3P51991 378 aaKnown RBP9□□□□□ -0.97
CAPN1-216ENST00000528739 C10orf91Q5T1B1 145 aa9□□□□□ -0.97
CAPN1-216ENST00000528739 FA2HQ7L5A8 372 aa9□□□□□ -0.97
CAPN1-216ENST00000528739 SCGB3A1Q96QR1 104 aa9□□□□□ -0.97
CAPN1-216ENST00000528739 A0A087WZ39 114 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 IGIPA6NJ69 53 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
CAPN1-216ENST00000528739 MT-ND6P03923 174 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 PRSS2P07478 247 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 UNQ6190/PRO20217Q6UXQ8 127 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
CAPN1-216ENST00000528739 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
CAPN1-216ENST00000528739 F8WDY8 70 aa8.98□□□□□ -0.97
CAPN1-216ENST00000528739 OXTP01178 125 aa8.98□□□□□ -0.97
CAPN1-216ENST00000528739 RNF151Q2KHN1 245 aa8.98□□□□□ -0.97
CAPN1-216ENST00000528739 PACRGQ96M98 296 aaPredicted RBP8.98□□□□□ -0.97
CAPN1-216ENST00000528739 AMELXQ99217 191 aa8.98□□□□□ -0.97
CAPN1-216ENST00000528739 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
CAPN1-216ENST00000528739 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
CAPN1-216ENST00000528739 TRAPPC1Q9Y5R8 145 aa8.98□□□□□ -0.97
CAPN1-216ENST00000528739 SNAPINO95295 136 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 NPSP0C0P6 89 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 SEC11AP67812 179 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 GAGE2EQ4V326 116 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 GAGE2DQ9UEU5 116 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 MYCBP2O75592 4640 aa8.97□□□□□ -0.97
CAPN1-216ENST00000528739 HERVK_113P63121 156 aa8.96□□□□□ -0.98
CAPN1-216ENST00000528739 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
CAPN1-216ENST00000528739 C6orf226Q5I0X4 101 aa8.96□□□□□ -0.98
CAPN1-216ENST00000528739 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
CAPN1-216ENST00000528739 ERASQ7Z444 233 aa8.96□□□□□ -0.98
CAPN1-216ENST00000528739 SVBPQ8N300 66 aa8.96□□□□□ -0.98
CAPN1-216ENST00000528739 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
CAPN1-216ENST00000528739 CKS1BP61024 79 aa8.95□□□□□ -0.98
CAPN1-216ENST00000528739 C2orf82Q6UX34 121 aa8.95□□□□□ -0.98
CAPN1-216ENST00000528739 C6orf48Q9UBA6 75 aa8.95□□□□□ -0.98
CAPN1-216ENST00000528739 LINC01549A6NIU2 74 aa8.94□□□□□ -0.98
CAPN1-216ENST00000528739 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
CAPN1-216ENST00000528739 LINC01561Q8N1V8 128 aa8.94□□□□□ -0.98
CAPN1-216ENST00000528739 NDUFA6P56556 154 aa8.93□□□□□ -0.98
CAPN1-216ENST00000528739 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
CAPN1-216ENST00000528739 Q6ZRP5 223 aa8.93□□□□□ -0.98
CAPN1-216ENST00000528739 LINC00469Q8N7U9 141 aa8.93□□□□□ -0.98
CAPN1-216ENST00000528739 TRBV30A0A0K0K1B3 111 aa8.92□□□□□ -0.98
CAPN1-216ENST00000528739 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
CAPN1-216ENST00000528739 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
CAPN1-216ENST00000528739 HERC1Q15751 4861 aa8.91□□□□□ -0.98
CAPN1-216ENST00000528739 FAM19A5Q7Z5A7 132 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-216ENST00000528739 LINC01546A6NGU7 62 aa8.9□□□□□ -0.98
CAPN1-216ENST00000528739 LINC00614P0C842 121 aa8.9□□□□□ -0.98
CAPN1-216ENST00000528739 TLX1NBP0CAT3 122 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms