RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 LST1O00453 97 aa13.38□□□□□ -0.27
TM9SF1-206ENST00000528669 MEIG1Q5JSS6 88 aa13.38□□□□□ -0.27
TM9SF1-206ENST00000528669 UBE2L6O14933 153 aa13.38□□□□□ -0.27
TM9SF1-206ENST00000528669 LINC01006Q8NI28 216 aa13.38□□□□□ -0.27
TM9SF1-206ENST00000528669 LINC01600Q96MT4 127 aa13.38□□□□□ -0.27
TM9SF1-206ENST00000528669 MTORP42345 2549 aa13.37□□□□□ -0.27
TM9SF1-206ENST00000528669 F5H768 121 aa13.37□□□□□ -0.27
TM9SF1-206ENST00000528669 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
TM9SF1-206ENST00000528669 ANK3Q12955 4377 aaKnown RBP13.36□□□□□ -0.27
TM9SF1-206ENST00000528669 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
TM9SF1-206ENST00000528669 C16orf74Q96GX8 76 aa13.35□□□□□ -0.27
TM9SF1-206ENST00000528669 IGKV3OR2-268A0A0C4DH90 116 aa13.34□□□□□ -0.27
TM9SF1-206ENST00000528669 H3BT86 120 aa13.34□□□□□ -0.27
TM9SF1-206ENST00000528669 TEX29Q8N6K0 151 aa13.34□□□□□ -0.27
TM9SF1-206ENST00000528669 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.27
TM9SF1-206ENST00000528669 CRLF1O75462 422 aa13.33□□□□□ -0.28
TM9SF1-206ENST00000528669 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
TM9SF1-206ENST00000528669 GAGE6Q13070 117 aa13.32□□□□□ -0.28
TM9SF1-206ENST00000528669 CITED1Q99966 193 aa13.32□□□□□ -0.28
TM9SF1-206ENST00000528669 IGLV1-51P01701 117 aa13.31□□□□□ -0.28
TM9SF1-206ENST00000528669 CSNK1G2-AS1Q8NCQ2 148 aa13.31□□□□□ -0.28
TM9SF1-206ENST00000528669 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
TM9SF1-206ENST00000528669 SNCGO76070 127 aa13.3□□□□□ -0.28
TM9SF1-206ENST00000528669 TENM4Q6N022 2769 aa13.29□□□□□ -0.28
TM9SF1-206ENST00000528669 TRBV6-4A0A1B0GX49 114 aa13.29□□□□□ -0.28
TM9SF1-206ENST00000528669 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
TM9SF1-206ENST00000528669 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
TM9SF1-206ENST00000528669 IGLV4-60A0A075B6I1 120 aa13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 HERV-K104P63124 156 aa13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 COX7A2LO14548 114 aa13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 COPS9Q8WXC6 57 aa13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 OVOL2Q9BRP0 275 aa13.28□□□□□ -0.28
TM9SF1-206ENST00000528669 TRAV26-1A0A087WT03 109 aa13.27□□□□□ -0.29
TM9SF1-206ENST00000528669 SHISA2Q6UWI4 295 aa13.27□□□□□ -0.29
TM9SF1-206ENST00000528669 C16orf95Q9H693 158 aa13.27□□□□□ -0.29
TM9SF1-206ENST00000528669 C15orf53Q8NAA6 179 aa13.27□□□□□ -0.29
TM9SF1-206ENST00000528669 PDZD2O15018 2839 aa13.26□□□□□ -0.29
TM9SF1-206ENST00000528669 FHL2Q14192 279 aa13.26□□□□□ -0.29
TM9SF1-206ENST00000528669 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
TM9SF1-206ENST00000528669 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 GAGE2BQ13066 116 aa13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 GAGE2EQ4V326 116 aa13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 CHCHD5Q9BSY4 110 aa13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 GAGE2DQ9UEU5 116 aa13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
TM9SF1-206ENST00000528669 TRBV6-8A0A0A6YYG3 113 aa13.24□□□□□ -0.29
TM9SF1-206ENST00000528669 TTC32Q5I0X7 151 aa13.24□□□□□ -0.29
TM9SF1-206ENST00000528669 MIR7-3HGQ8N6C7 128 aa13.23□□□□□ -0.29
TM9SF1-206ENST00000528669 FAM110AQ9BQ89 295 aa13.23□□□□□ -0.29
TM9SF1-206ENST00000528669 DEFB130BP0DP73 79 aa13.23□□□□□ -0.29
TM9SF1-206ENST00000528669 DEFB130AP0DP74 79 aa13.23□□□□□ -0.29
TM9SF1-206ENST00000528669 ITPR2Q14571 2701 aa13.22□□□□□ -0.29
TM9SF1-206ENST00000528669 DEFB121Q5J5C9 76 aa13.21□□□□□ -0.29
TM9SF1-206ENST00000528669 FAM218AQ96MZ4 157 aa13.21□□□□□ -0.29
TM9SF1-206ENST00000528669 C5orf38Q86SI9 138 aa13.21□□□□□ -0.3
TM9SF1-206ENST00000528669 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
TM9SF1-206ENST00000528669 LINC00158P58513 81 aa13.2□□□□□ -0.3
TM9SF1-206ENST00000528669 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
TM9SF1-206ENST00000528669 SND1-IT1Q9HBX3 110 aa13.18□□□□□ -0.3
TM9SF1-206ENST00000528669 IGKV2-28A0A075B6P5 120 aa13.18□□□□□ -0.3
TM9SF1-206ENST00000528669 IGKV2D-28P01615 120 aa13.18□□□□□ -0.3
TM9SF1-206ENST00000528669 CRPP02741 224 aa13.18□□□□□ -0.3
TM9SF1-206ENST00000528669 NHLRC4P0CG21 123 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-206ENST00000528669 GCN1Q92616 2671 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-206ENST00000528669 NDUFV3P56181 108 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-206ENST00000528669 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-206ENST00000528669 TRAV13-2A0A0B4J235 113 aa13.16□□□□□ -0.3
TM9SF1-206ENST00000528669 FAM240AA0A1B0GVK7 77 aa13.16□□□□□ -0.3
TM9SF1-206ENST00000528669 BAALC-AS2P0C853 105 aa13.16□□□□□ -0.3
TM9SF1-206ENST00000528669 PFN2P35080 140 aa13.16□□□□□ -0.3
TM9SF1-206ENST00000528669 TRACP01848 142 aa13.15□□□□□ -0.3
TM9SF1-206ENST00000528669 Q9HAA7 133 aa13.15□□□□□ -0.3
TM9SF1-206ENST00000528669 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
TM9SF1-206ENST00000528669 HILS1P60008 231 aa13.15□□□□□ -0.3
TM9SF1-206ENST00000528669 KRTAP10-3P60369 221 aa13.15□□□□□ -0.3
TM9SF1-206ENST00000528669 A0A087WZ39 114 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 GYPEP15421 78 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 A0A096LPF7 62 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 LINC00959A0A1B0GUT2 108 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 CCL18P55774 89 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 SMR3AQ99954 134 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 PPDPFQ9H3Y8 114 aa13.14□□□□□ -0.31
TM9SF1-206ENST00000528669 RPL28P46779 137 aaKnown RBP13.13□□□□□ -0.31
TM9SF1-206ENST00000528669 Q6Q795 121 aa13.13□□□□□ -0.31
TM9SF1-206ENST00000528669 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
TM9SF1-206ENST00000528669 C22orf24Q9Y442 160 aa13.13□□□□□ -0.31
TM9SF1-206ENST00000528669 PF4P02776 101 aa13.12□□□□□ -0.31
TM9SF1-206ENST00000528669 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
TM9SF1-206ENST00000528669 XCL1P47992 114 aa13.12□□□□□ -0.31
TM9SF1-206ENST00000528669 SMIM11BQ8TCY0 68 aa13.11□□□□□ -0.31
TM9SF1-206ENST00000528669 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
TM9SF1-206ENST00000528669 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
TM9SF1-206ENST00000528669 IBA57-AS1B1ANH7 110 aa13.1□□□□□ -0.31
TM9SF1-206ENST00000528669 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
TM9SF1-206ENST00000528669 C6orf226Q5I0X4 101 aa13.09□□□□□ -0.31
TM9SF1-206ENST00000528669 A0A087WYN8 130 aa13.09□□□□□ -0.31
TM9SF1-206ENST00000528669 X6R8D5 127 aa13.09□□□□□ -0.31
TM9SF1-206ENST00000528669 PAX4O43316 350 aa13.08□□□□□ -0.32
TM9SF1-206ENST00000528669 LINC00612Q8N6U2 182 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms