RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 Q8N8P6 123 aa20.87■□□□□ 0.93
SSSCA1-205ENST00000527920 SEC11CQ9BY50 192 aa20.87■□□□□ 0.93
SSSCA1-205ENST00000527920 IGHV3OR16-9A0A0B4J2B5 98 aa20.86■□□□□ 0.93
SSSCA1-205ENST00000527920 IFITM10A6NMD0 228 aa20.86■□□□□ 0.93
SSSCA1-205ENST00000527920 OXTP01178 125 aa20.86■□□□□ 0.93
SSSCA1-205ENST00000527920 LOC389332A0A1B0GUA5 103 aa20.85■□□□□ 0.93
SSSCA1-205ENST00000527920 K7EMI3 77 aa20.85■□□□□ 0.93
SSSCA1-205ENST00000527920 OR10D4PQ8NGN7 298 aa20.85■□□□□ 0.93
SSSCA1-205ENST00000527920 STPG4Q8N801 248 aa20.84■□□□□ 0.93
SSSCA1-205ENST00000527920 C7orf33Q8WU49 177 aa20.84■□□□□ 0.93
SSSCA1-205ENST00000527920 IGLV4-3A0A075B6K6 122 aa20.82■□□□□ 0.92
SSSCA1-205ENST00000527920 HNRNPA3P51991 378 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-205ENST00000527920 Q6ZRU5 148 aa20.82■□□□□ 0.92
SSSCA1-205ENST00000527920 CAMK2N2Q96S95 79 aa20.82■□□□□ 0.92
SSSCA1-205ENST00000527920 SPAG11BQ08648 103 aa20.81■□□□□ 0.92
SSSCA1-205ENST00000527920 ORMDL2Q53FV1 153 aa20.81■□□□□ 0.92
SSSCA1-205ENST00000527920 NXT2Q9NPJ8 142 aaKnown RBP20.81■□□□□ 0.92
SSSCA1-205ENST00000527920 CYSLTR1Q9Y271 337 aa20.81■□□□□ 0.92
SSSCA1-205ENST00000527920 LRP1Q07954 4544 aaKnown RBP20.81■□□□□ 0.92
SSSCA1-205ENST00000527920 TMEM141Q96I45 108 aa20.8■□□□□ 0.92
SSSCA1-205ENST00000527920 LOC107984640A0A0U1RRK4 108 aa20.79■□□□□ 0.92
SSSCA1-205ENST00000527920 F8WDY8 70 aa20.79■□□□□ 0.92
SSSCA1-205ENST00000527920 NPSP0C0P6 89 aa20.78■□□□□ 0.92
SSSCA1-205ENST00000527920 C2orf66Q6UXQ4 117 aa20.78■□□□□ 0.92
SSSCA1-205ENST00000527920 COMMD7Q86VX2 200 aa20.78■□□□□ 0.92
SSSCA1-205ENST00000527920 PTTG1IPP53801 180 aa20.77■□□□□ 0.92
SSSCA1-205ENST00000527920 RNF151Q2KHN1 245 aa20.76■□□□□ 0.91
SSSCA1-205ENST00000527920 TGIF2-C20orf24A0A0A6YYL0 155 aa20.75■□□□□ 0.91
SSSCA1-205ENST00000527920 TEX43Q6ZNM6 134 aa20.75■□□□□ 0.91
SSSCA1-205ENST00000527920 ORAOV1Q8WV07 137 aa20.75■□□□□ 0.91
SSSCA1-205ENST00000527920 S100PP25815 95 aa20.74■□□□□ 0.91
SSSCA1-205ENST00000527920 LINC00242Q5T6M2 205 aa20.74■□□□□ 0.91
SSSCA1-205ENST00000527920 A0A087WZ39 114 aa20.73■□□□□ 0.91
SSSCA1-205ENST00000527920 C10orf91Q5T1B1 145 aa20.73■□□□□ 0.91
SSSCA1-205ENST00000527920 PKHD1L1Q86WI1 4243 aa20.73■□□□□ 0.91
SSSCA1-205ENST00000527920 G0S2P27469 103 aa20.72■□□□□ 0.91
SSSCA1-205ENST00000527920 Q6ZN92 141 aa20.72■□□□□ 0.91
SSSCA1-205ENST00000527920 C2orf88Q9BSF0 95 aa20.72■□□□□ 0.91
SSSCA1-205ENST00000527920 FAT3Q8TDW7 4589 aa20.72■□□□□ 0.91
SSSCA1-205ENST00000527920 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP20.71■□□□□ 0.91
SSSCA1-205ENST00000527920 UBE2D1P51668 147 aa20.71■□□□□ 0.91
SSSCA1-205ENST00000527920 GNB1LQ9BYB4 327 aa20.71■□□□□ 0.91
SSSCA1-205ENST00000527920 MRPL35Q9NZE8 188 aaKnown RBP20.71■□□□□ 0.91
SSSCA1-205ENST00000527920 AMELXQ99217 191 aa20.7■□□□□ 0.9
SSSCA1-205ENST00000527920 IGIPA6NJ69 53 aa20.69■□□□□ 0.9
SSSCA1-205ENST00000527920 GAGE2BQ13066 116 aa20.69■□□□□ 0.9
SSSCA1-205ENST00000527920 CARHSP1Q9Y2V2 147 aaKnown RBP20.69■□□□□ 0.9
SSSCA1-205ENST00000527920 KIAA1644Q3SXP7 199 aa20.68■□□□□ 0.9
SSSCA1-205ENST00000527920 LINC00173Q6ZV60 143 aa20.68■□□□□ 0.9
SSSCA1-205ENST00000527920 NDUFA1O15239 70 aa20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 PRR3P79522 188 aaKnown RBP20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 RHEBQ15382 184 aa20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 COX19Q49B96 90 aa20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 LINC01561Q8N1V8 128 aa20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 VCX2Q9H322 139 aa20.67■□□□□ 0.9
SSSCA1-205ENST00000527920 PAPPA-AS1Q5QFB9 102 aa20.65■□□□□ 0.9
SSSCA1-205ENST00000527920 TIMM17AQ99595 171 aa20.64■□□□□ 0.89
SSSCA1-205ENST00000527920 KIAA0087Q14695 138 aa20.63■□□□□ 0.89
SSSCA1-205ENST00000527920 FAM19A3Q7Z5A8 133 aa20.63■□□□□ 0.89
SSSCA1-205ENST00000527920 TOMM6Q96B49 74 aa20.63■□□□□ 0.89
SSSCA1-205ENST00000527920 MT-ND6P03923 174 aa20.62■□□□□ 0.89
SSSCA1-205ENST00000527920 RPL18AQ02543 176 aaKnown RBP20.62■□□□□ 0.89
SSSCA1-205ENST00000527920 A0A0J9YXV3 536 aa20.6■□□□□ 0.89
SSSCA1-205ENST00000527920 TLX1NBP0CAT3 122 aa20.6■□□□□ 0.89
SSSCA1-205ENST00000527920 ALKBH7Q9BT30 221 aaPredicted RBP20.6■□□□□ 0.89
SSSCA1-205ENST00000527920 LINC01546A6NGU7 62 aa20.59■□□□□ 0.89
SSSCA1-205ENST00000527920 C10orf25Q5T742 122 aa20.59■□□□□ 0.89
SSSCA1-205ENST00000527920 ZC2HC1BQ5TFG8 222 aa20.59■□□□□ 0.89
SSSCA1-205ENST00000527920 A0A1W2PNN7 141 aa20.58■□□□□ 0.89
SSSCA1-205ENST00000527920 LINC01549A6NIU2 74 aa20.58■□□□□ 0.89
SSSCA1-205ENST00000527920 UNQ6190/PRO20217Q6UXQ8 127 aa20.58■□□□□ 0.89
SSSCA1-205ENST00000527920 SEC11AP67812 179 aa20.57■□□□□ 0.88
SSSCA1-205ENST00000527920 RPS10P5Q9NQ39 176 aa20.57■□□□□ 0.88
SSSCA1-205ENST00000527920 C6orf48Q9UBA6 75 aa20.57■□□□□ 0.88
SSSCA1-205ENST00000527920 C9orf116Q5BN46 136 aaPredicted RBP20.56■□□□□ 0.88
SSSCA1-205ENST00000527920 ERASQ7Z444 233 aa20.56■□□□□ 0.88
SSSCA1-205ENST00000527920 Q6ZRP5 223 aa20.55■□□□□ 0.88
SSSCA1-205ENST00000527920 TRBV30A0A0K0K1B3 111 aa20.54■□□□□ 0.88
SSSCA1-205ENST00000527920 HERVK_113P63121 156 aa20.53■□□□□ 0.88
SSSCA1-205ENST00000527920 MRPL18Q9H0U6 180 aaKnown RBP20.53■□□□□ 0.88
SSSCA1-205ENST00000527920 SERTAD4-AS1Q5TG53 156 aa20.52■□□□□ 0.88
SSSCA1-205ENST00000527920 SCGB3A1Q96QR1 104 aa20.51■□□□□ 0.87
SSSCA1-205ENST00000527920 MT1HL1P0DM35 61 aa20.5■□□□□ 0.87
SSSCA1-205ENST00000527920 FABP9Q0Z7S8 132 aa20.5■□□□□ 0.87
SSSCA1-205ENST00000527920 C2orf82Q6UX34 121 aa20.47■□□□□ 0.87
SSSCA1-205ENST00000527920 Q8IZM0 81 aa20.47■□□□□ 0.87
SSSCA1-205ENST00000527920 PACRGQ96M98 296 aaPredicted RBP20.47■□□□□ 0.87
SSSCA1-205ENST00000527920 GEMIN7Q9H840 131 aaKnown RBP20.47■□□□□ 0.87
SSSCA1-205ENST00000527920 PRSS2P07478 247 aa20.46■□□□□ 0.87
SSSCA1-205ENST00000527920 SPINK6Q6UWN8 80 aa20.46■□□□□ 0.87
SSSCA1-205ENST00000527920 FA2HQ7L5A8 372 aa20.46■□□□□ 0.87
SSSCA1-205ENST00000527920 CDKN2A-AS1Q9UH64 79 aa20.46■□□□□ 0.87
SSSCA1-205ENST00000527920 NDUFC2-KCTD14E9PQ53 114 aa20.44■□□□□ 0.86
SSSCA1-205ENST00000527920 APOC3P02656 99 aa20.43■□□□□ 0.86
SSSCA1-205ENST00000527920 SRSF9Q13242 221 aaKnown RBP eCLIP20.43■□□□□ 0.86
SSSCA1-205ENST00000527920 NDUFA5Q16718 116 aa20.43■□□□□ 0.86
SSSCA1-205ENST00000527920 SMCO4Q9NRQ5 59 aa20.43■□□□□ 0.86
SSSCA1-205ENST00000527920 SVBPQ8N300 66 aa20.42■□□□□ 0.86
SSSCA1-205ENST00000527920 SNAPINO95295 136 aa20.41■□□□□ 0.86
SSSCA1-205ENST00000527920 CKS1BP61024 79 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms