RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 MBD5Q9P267 1494 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 TSC2P49815 1807 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 COMMD6Q7Z4G1 85 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 C5orf38Q86SI9 138 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 HYDINQ4G0P3 5121 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 SPTA1P02549 2419 aa-1.09□□□□□ -2.58
NPM1-206ENST00000519955 SETD2Q9BYW2 2564 aaPredicted RBP-1.09□□□□□ -2.58
NPM1-206ENST00000519955 STARD9Q9P2P6 4700 aa-1.1□□□□□ -2.58
NPM1-206ENST00000519955 IFNGP01579 166 aa-1.1□□□□□ -2.59
NPM1-206ENST00000519955 MRPL54Q6P161 138 aaKnown RBP-1.1□□□□□ -2.59
NPM1-206ENST00000519955 MXRA5Q9NR99 2828 aa-1.11□□□□□ -2.59
NPM1-206ENST00000519955 CNOT1A5YKK6 2376 aaKnown RBP-1.11□□□□□ -2.59
NPM1-206ENST00000519955 LOC730098B7Z3J9 87 aa-1.11□□□□□ -2.59
NPM1-206ENST00000519955 FOCADQ5VW36 1801 aa-1.11□□□□□ -2.59
NPM1-206ENST00000519955 RYR3Q15413 4870 aa-1.11□□□□□ -2.59
NPM1-206ENST00000519955 POLA1P09884 1462 aaPredicted RBP-1.12□□□□□ -2.59
NPM1-206ENST00000519955 ATRQ13535 2644 aa-1.12□□□□□ -2.59
NPM1-206ENST00000519955 MGPP08493 103 aa-1.12□□□□□ -2.59
NPM1-206ENST00000519955 S100A12P80511 92 aa-1.12□□□□□ -2.59
NPM1-206ENST00000519955 TSC22D3Q99576 134 aa-1.12□□□□□ -2.59
NPM1-206ENST00000519955 MYOZ3Q8TDC0 251 aa-1.13□□□□□ -2.59
NPM1-206ENST00000519955 TMEM263Q8WUH6 116 aaKnown RBP-1.13□□□□□ -2.59
NPM1-206ENST00000519955 GAPVD1Q14C86 1478 aa-1.13□□□□□ -2.59
NPM1-206ENST00000519955 CHD8Q9HCK8 2581 aa-1.13□□□□□ -2.59
NPM1-206ENST00000519955 MYOM1P52179 1685 aa-1.13□□□□□ -2.59
NPM1-206ENST00000519955 ARHGEF12Q9NZN5 1544 aa-1.14□□□□□ -2.59
NPM1-206ENST00000519955 K7EP13 123 aa-1.14□□□□□ -2.59
NPM1-206ENST00000519955 UBR4Q5T4S7 5183 aa-1.14□□□□□ -2.59
NPM1-206ENST00000519955 RYR1P21817 5038 aa-1.14□□□□□ -2.59
NPM1-206ENST00000519955 NSD3Q9BZ95 1437 aa-1.15□□□□□ -2.59
NPM1-206ENST00000519955 EPPK1P58107 5090 aaKnown RBP-1.15□□□□□ -2.59
NPM1-206ENST00000519955 MYH7P12883 1935 aa-1.15□□□□□ -2.59
NPM1-206ENST00000519955 GOLGA4Q13439 2230 aaKnown RBP-1.15□□□□□ -2.59
NPM1-206ENST00000519955 SPINK4O60575 86 aa-1.15□□□□□ -2.59
NPM1-206ENST00000519955 NXT2Q9NPJ8 142 aaKnown RBP-1.15□□□□□ -2.59
NPM1-206ENST00000519955 PSME4Q14997 1843 aa-1.15□□□□□ -2.59
NPM1-206ENST00000519955 SVEP1Q4LDE5 3571 aa-1.16□□□□□ -2.59
NPM1-206ENST00000519955 LOC100130705A0A1B0GUX0 176 aa-1.16□□□□□ -2.6
NPM1-206ENST00000519955 CHKB-CPT1BH3BT56 60 aa-1.16□□□□□ -2.6
NPM1-206ENST00000519955 FAIMQ9NVQ4 179 aa-1.16□□□□□ -2.6
NPM1-206ENST00000519955 LINC00474Q9P2X8 69 aa-1.16□□□□□ -2.6
NPM1-206ENST00000519955 C1orf54Q8WWF1 131 aa-1.17□□□□□ -2.6
NPM1-206ENST00000519955 UQCR10Q9UDW1 63 aa-1.17□□□□□ -2.6
NPM1-206ENST00000519955 DNAH6Q9C0G6 4158 aa-1.18□□□□□ -2.6
NPM1-206ENST00000519955 TRBV7-4A0A0J9YYF1 115 aa-1.18□□□□□ -2.6
NPM1-206ENST00000519955 WHAMMP3Q1A5X7 153 aa-1.18□□□□□ -2.6
NPM1-206ENST00000519955 SPRR4Q96PI1 79 aa-1.18□□□□□ -2.6
NPM1-206ENST00000519955 FAM107BQ9H098 131 aa-1.18□□□□□ -2.6
NPM1-206ENST00000519955 SMG6Q86US8 1419 aaKnown RBP-1.18□□□□□ -2.6
NPM1-206ENST00000519955 PRKDCP78527 4128 aaKnown RBP-1.19□□□□□ -2.6
NPM1-206ENST00000519955 KTN1Q86UP2 1357 aaKnown RBP-1.19□□□□□ -2.6
NPM1-206ENST00000519955 TULP4Q9NRJ4 1543 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 EPG5Q9HCE0 2579 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 IGLC1P0CG04 106 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 AKAIN1P0CW23 69 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 C10orf113Q5VZT2 155 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 CDC42SE2Q9NRR3 84 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 SHROOM2Q13796 1616 aa-1.19□□□□□ -2.6
NPM1-206ENST00000519955 USP9YO00507 2555 aaPredicted RBP-1.2□□□□□ -2.6
NPM1-206ENST00000519955 FXYD6Q9H0Q3 95 aa-1.2□□□□□ -2.6
NPM1-206ENST00000519955 KDM5AP29375 1690 aaKnown RBP-1.2□□□□□ -2.6
NPM1-206ENST00000519955 NBPF19A0A087WUL8 3843 aa-1.21□□□□□ -2.6
NPM1-206ENST00000519955 OOSP1A8MZH6 123 aa-1.21□□□□□ -2.6
NPM1-206ENST00000519955 HMGN1P05114 100 aa-1.21□□□□□ -2.6
NPM1-206ENST00000519955 ITPR3Q14573 2671 aa-1.21□□□□□ -2.6
NPM1-206ENST00000519955 KIAA1109Q2LD37 5005 aa-1.21□□□□□ -2.6
NPM1-206ENST00000519955 URB1O60287 2271 aaKnown RBP-1.22□□□□□ -2.6
NPM1-206ENST00000519955 QRICH2Q9H0J4 1663 aa-1.22□□□□□ -2.6
NPM1-206ENST00000519955 A2ML1A8K2U0 1454 aa-1.22□□□□□ -2.6
NPM1-206ENST00000519955 UBA52P62987 128 aaKnown RBP-1.22□□□□□ -2.6
NPM1-206ENST00000519955 PP6455Q8WZ26 134 aa-1.22□□□□□ -2.6
NPM1-206ENST00000519955 ARHGEF5Q12774 1597 aa-1.22□□□□□ -2.61
NPM1-206ENST00000519955 MAGI1Q96QZ7 1491 aaPredicted RBP-1.23□□□□□ -2.61
NPM1-206ENST00000519955 HECTD1Q9ULT8 2610 aa-1.23□□□□□ -2.61
NPM1-206ENST00000519955 BIRC6Q9NR09 4857 aa-1.23□□□□□ -2.61
NPM1-206ENST00000519955 BTAF1O14981 1849 aa-1.23□□□□□ -2.61
NPM1-206ENST00000519955 UBE2L5PA0A1B0GUS4 154 aa-1.23□□□□□ -2.61
NPM1-206ENST00000519955 UBE2L3P68036 154 aaKnown RBP-1.23□□□□□ -2.61
NPM1-206ENST00000519955 ROBO1Q9Y6N7 1651 aa-1.23□□□□□ -2.61
NPM1-206ENST00000519955 ARL2-SNX15V9GYD0 113 aa-1.24□□□□□ -2.61
NPM1-206ENST00000519955 MUC17Q685J3 4493 aa-1.24□□□□□ -2.61
NPM1-206ENST00000519955 LINC00959A0A1B0GUT2 108 aa-1.25□□□□□ -2.61
NPM1-206ENST00000519955 C9orf153Q5TBE3 101 aa-1.25□□□□□ -2.61
NPM1-206ENST00000519955 FAM223AQ8IWN6 122 aa-1.25□□□□□ -2.61
NPM1-206ENST00000519955 DEFB105AQ8NG35 78 aa-1.26□□□□□ -2.61
NPM1-206ENST00000519955 FAM167A-AS1Q96KT0 104 aa-1.26□□□□□ -2.61
NPM1-206ENST00000519955 HMGXB3Q12766 1538 aa-1.26□□□□□ -2.61
NPM1-206ENST00000519955 SPRR2AP35326 72 aa-1.27□□□□□ -2.61
NPM1-206ENST00000519955 ATP5EP56381 51 aaPredicted RBP-1.27□□□□□ -2.61
NPM1-206ENST00000519955 ZFHX3Q15911 3703 aa-1.27□□□□□ -2.61
NPM1-206ENST00000519955 TET3O43151 1660 aa-1.28□□□□□ -2.61
NPM1-206ENST00000519955 M0R2T5 61 aa-1.28□□□□□ -2.61
NPM1-206ENST00000519955 FDCSPQ8NFU4 85 aa-1.28□□□□□ -2.61
NPM1-206ENST00000519955 SETBP1Q9Y6X0 1596 aa-1.29□□□□□ -2.62
NPM1-206ENST00000519955 GNG11P61952 73 aa-1.29□□□□□ -2.62
NPM1-206ENST00000519955 LINC01600Q96MT4 127 aa-1.29□□□□□ -2.62
NPM1-206ENST00000519955 DPH3P1Q9H4G8 78 aa-1.29□□□□□ -2.62
NPM1-206ENST00000519955 TCHHQ07283 1943 aa-1.29□□□□□ -2.62
NPM1-206ENST00000519955 EHBP1L1Q8N3D4 1523 aa-1.3□□□□□ -2.62
NPM1-206ENST00000519955 FAM24AA6NFZ4 105 aa-1.3□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms