RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 IGHV3-30P01768 117 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 IGHV3-30-5P0DP03 117 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 KIF25-AS1Q9Y6Z4 181 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 COL12A1Q99715 3063 aa8.22□□□□□ -1.09
PCDHGB4-201ENST00000519479 F8WEM9 126 aa8.21□□□□□ -1.09
PCDHGB4-201ENST00000519479 SVIPQ8NHG7 77 aa8.21□□□□□ -1.09
PCDHGB4-201ENST00000519479 LINC01546A6NGU7 62 aa8.21□□□□□ -1.1
PCDHGB4-201ENST00000519479 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
PCDHGB4-201ENST00000519479 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 C5orf47Q569G3 176 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 FAM19A4Q96LR4 140 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 TEX49A0A1B0GTD5 131 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 ATP5G1P05496 136 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 C16orf95Q9H693 158 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
PCDHGB4-201ENST00000519479 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 PRO0255Q9UI72 69 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 CCL18P55774 89 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 LINC00315P59091 139 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 SPART-AS1P0CW21 52 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 TIRAPP58753 221 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
PCDHGB4-201ENST00000519479 SMR3AQ99954 134 aa8.18□□□□□ -1.1
PCDHGB4-201ENST00000519479 TMEM258P61165 79 aa8.18□□□□□ -1.1
PCDHGB4-201ENST00000519479 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
PCDHGB4-201ENST00000519479 MAP1AP78559 2803 aaPredicted RBP8.18□□□□□ -1.1
PCDHGB4-201ENST00000519479 UQCRQO14949 82 aa8.18□□□□□ -1.1
PCDHGB4-201ENST00000519479 COX7A2LO14548 114 aa8.17□□□□□ -1.1
PCDHGB4-201ENST00000519479 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
PCDHGB4-201ENST00000519479 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 FAM222AQ5U5X8 452 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 NDUFA1O15239 70 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 Q6ZSN1 163 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 TACC2O95359 2948 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 TRIAP1O43715 76 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 LINC00482Q8N8I6 264 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 IL17DQ8TAD2 202 aa8.16□□□□□ -1.1
PCDHGB4-201ENST00000519479 UBE2D1P51668 147 aa8.15□□□□□ -1.1
PCDHGB4-201ENST00000519479 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
PCDHGB4-201ENST00000519479 TRBV6-8A0A0A6YYG3 113 aa8.15□□□□□ -1.1
PCDHGB4-201ENST00000519479 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
PCDHGB4-201ENST00000519479 KLK5Q9Y337 293 aaPredicted RBP8.15□□□□□ -1.1
PCDHGB4-201ENST00000519479 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.11
PCDHGB4-201ENST00000519479 IGKV2D-24A0A075B6R9 120 aa8.14□□□□□ -1.11
PCDHGB4-201ENST00000519479 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
PCDHGB4-201ENST00000519479 F8P00451 2351 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 Q9HAA7 133 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 FSHBP01225 129 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 UBE2D3P61077 147 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 UBE2D2P62837 147 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 POM121L12Q8N7R1 296 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 ORMDL1Q9P0S3 153 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 ITPR1Q14643 2758 aa8.13□□□□□ -1.11
PCDHGB4-201ENST00000519479 HECTD1Q9ULT8 2610 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 H0YGX0 51 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 H7C423 109 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 Q8N2B8 174 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 AMELXQ99217 191 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 USP24Q9UPU5 2620 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 SMIM9A6NGZ8 99 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 LINC00242Q5T6M2 205 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 BEAN1Q3B7T3 259 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 KLK12Q9UKR0 248 aa8.12□□□□□ -1.11
PCDHGB4-201ENST00000519479 M0QXV9 152 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 DCHS2Q6V1P9 2916 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 hADV29S1A0JD25 119 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 IGLV1-51P01701 117 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 DSCR8Q96T75 97 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 TIMM17BO60830 172 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 NDUFC2O95298 119 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
PCDHGB4-201ENST00000519479 ASH1LQ9NR48 2969 aaKnown RBP8.1□□□□□ -1.11
PCDHGB4-201ENST00000519479 LECT2O14960 151 aa8.1□□□□□ -1.11
PCDHGB4-201ENST00000519479 UBE2BP63146 152 aa8.1□□□□□ -1.11
PCDHGB4-201ENST00000519479 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
PCDHGB4-201ENST00000519479 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
PCDHGB4-201ENST00000519479 A0A096LNT2 108 aa8.09□□□□□ -1.11
PCDHGB4-201ENST00000519479 C11orf72Q8NBR9 251 aa8.09□□□□□ -1.11
PCDHGB4-201ENST00000519479 COX6A2Q02221 97 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 SPAG11BQ08648 103 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 Q9UF83 564 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 ADAMTSL4-AS1Q5T5F5 129 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 REG3AQ06141 175 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 SDIM1Q6ZPB5 146 aa8.08□□□□□ -1.12
PCDHGB4-201ENST00000519479 CXCL5P42830 114 aa8.07□□□□□ -1.12
PCDHGB4-201ENST00000519479 C20orf197Q8N268 126 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms