RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 ORAOV1Q8WV07 137 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 SMIM12Q96EX1 92 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 CTDSP1Q9GZU7 261 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 ST20Q9HBF5 79 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 CYTL1Q9NRR1 136 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 C6orf48Q9UBA6 75 aa3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 CSDC2Q9Y534 153 aaKnown RBP3.72□□□□□ -1.81
CTNNA1-214ENST00000519116 UPK1BO75841 260 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 CFC1BP0CG36 223 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 FAM229BQ4G0N7 80 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 KRTAP13-2Q52LG2 175 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 KCNRGQ8N5I3 272 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 SFT2D1Q8WV19 159 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 S100ZQ8WXG8 99 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 BIN3Q9NQY0 253 aa3.71□□□□□ -1.82
CTNNA1-214ENST00000519116 TRBV27A0A0K0K1C4 114 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 BCE1O60756 84 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 RNASE13Q5GAN3 156 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 LINC00299Q6ZSB3 139 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 MBD3L1Q8WWY6 194 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 C11orf52Q96A22 123 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CTNNA1-214ENST00000519116 FXYD6-FXYD2A0A087WZ82 144 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 IGKV2D-26A0A0A0MRZ7 120 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 TRBV30A0A0K0K1B3 111 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 A0A1B0GV50 99 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 FCER1GP30273 86 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 GNG4P50150 75 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 POLR2KP53803 58 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 FOXA3P55318 350 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 CCL20P78556 96 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 LINC00242Q5T6M2 205 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 FAM213BQ8TBF2 198 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 PACRGQ96M98 296 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 RNASE7Q9H1E1 156 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 UBE2D4Q9Y2X8 147 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 C22orf24Q9Y442 160 aa3.69□□□□□ -1.82
CTNNA1-214ENST00000519116 IGHV3OR16-9A0A0B4J2B5 98 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 RAB19A4D1S5 217 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 UMAD1C9J7I0 102 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 VCYO14598 125 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 IFITM3Q01628 133 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 Q5BKY6 102 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 Q6ZUT4 128 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 TMEM18Q96B42 140 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 TIMM21Q9BVV7 248 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 MANBALQ9NQG1 85 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 TP73-AS1Q9UF72 201 aa3.68□□□□□ -1.82
CTNNA1-214ENST00000519116 GIPP09681 153 aaPredicted RBP3.67□□□□□ -1.82
CTNNA1-214ENST00000519116 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
CTNNA1-214ENST00000519116 KRTAP13-3Q3SY46 172 aa3.67□□□□□ -1.82
CTNNA1-214ENST00000519116 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
CTNNA1-214ENST00000519116 NDUFA13Q9P0J0 144 aa3.67□□□□□ -1.82
CTNNA1-214ENST00000519116 TGIF2-C20orf24A0A0A6YYL0 155 aa3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 UBE2AP49459 152 aa3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 MT1HP80294 61 aa3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 GNG13Q9P2W3 67 aa3.66□□□□□ -1.82
CTNNA1-214ENST00000519116 TRBV20OR9-2A0A075B6H5 130 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 A0A1B0GVG6 124 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 IFITM10A6NMD0 228 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 ZNF727A8MUV8 499 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 PDE6DO43924 150 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 PPP1R17O96001 155 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 HBBP68871 147 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 C2orf82Q6UX34 121 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 BORCS7Q96B45 105 aa3.65□□□□□ -1.83
CTNNA1-214ENST00000519116 TCAPO15273 167 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 SUMO2P61956 95 aaKnown RBP3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 MRPS36P82909 103 aaKnown RBP3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 LINC00469Q8N7U9 141 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 TMEM191AQ9H0A3 160 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 XAGE1AQ9HD64 81 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 MED9Q9NWA0 146 aa3.64□□□□□ -1.83
CTNNA1-214ENST00000519116 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 A8MWL6 223 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 PPP1R2P9O14990 202 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 ARPC5O15511 151 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 RAB4AP20338 218 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 KRTAP10-6P60371 365 aaPredicted RBP3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 LINC00167Q96N53 147 aa3.63□□□□□ -1.83
CTNNA1-214ENST00000519116 A0A1B0GUT8 65 aa3.62□□□□□ -1.83
CTNNA1-214ENST00000519116 TEX46H3BTG2 121 aa3.62□□□□□ -1.83
CTNNA1-214ENST00000519116 K7EN84 100 aa3.62□□□□□ -1.83
CTNNA1-214ENST00000519116 GATCO43716 136 aaKnown RBP3.62□□□□□ -1.83
CTNNA1-214ENST00000519116 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
CTNNA1-214ENST00000519116 PRSS2P07478 247 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms