RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CRIP1P50238 77 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 IBA57-AS1B1ANH7 110 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
PCDHGA6-201ENST00000517434 CRIP3Q6Q6R5 217 aa9.11□□□□□ -0.95
PCDHGA6-201ENST00000517434 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
PCDHGA6-201ENST00000517434 UBE2D1P51668 147 aa9.11□□□□□ -0.95
PCDHGA6-201ENST00000517434 RETNQ9HD89 108 aa9.11□□□□□ -0.95
PCDHGA6-201ENST00000517434 UBE2D3P61077 147 aa9.1□□□□□ -0.95
PCDHGA6-201ENST00000517434 UBE2D2P62837 147 aa9.1□□□□□ -0.95
PCDHGA6-201ENST00000517434 Q8N6K4 173 aa9.1□□□□□ -0.95
PCDHGA6-201ENST00000517434 PRO0628Q9UI54 55 aa9.1□□□□□ -0.95
PCDHGA6-201ENST00000517434 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
PCDHGA6-201ENST00000517434 DEFB1P60022 68 aa9.09□□□□□ -0.95
PCDHGA6-201ENST00000517434 Q6ZS46 218 aa9.09□□□□□ -0.95
PCDHGA6-201ENST00000517434 SPTBN4Q9H254 2564 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 EIF4EBP1Q13541 118 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 PYGO1Q9Y3Y4 419 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 MYO9AB2RTY4 2548 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 NRACQ8N912 160 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 H0Y9J4 135 aa9.08□□□□□ -0.96
PCDHGA6-201ENST00000517434 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
PCDHGA6-201ENST00000517434 IGKV4-1P06312 121 aa9.07□□□□□ -0.96
PCDHGA6-201ENST00000517434 CRYGDP07320 174 aa9.07□□□□□ -0.96
PCDHGA6-201ENST00000517434 ZNF580Q9UK33 172 aa9.07□□□□□ -0.96
PCDHGA6-201ENST00000517434 IGLV2-11P01706 119 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 PRR15LQ9BU68 103 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 IGLV1-40P01703 118 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 CDIP1Q9H305 208 aa9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA6-201ENST00000517434 TRBV6-4A0A1B0GX49 114 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 C16orf95Q9H693 158 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 ZFYVE26Q68DK2 2539 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 CCKP06307 115 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 Q6ZTI0 123 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
PCDHGA6-201ENST00000517434 NUPR2A6NF83 97 aa9.04□□□□□ -0.96
PCDHGA6-201ENST00000517434 M0QY20 66 aa9.04□□□□□ -0.96
PCDHGA6-201ENST00000517434 ZFAND3Q9H8U3 227 aa9.04□□□□□ -0.96
PCDHGA6-201ENST00000517434 CPAMD8Q8IZJ3 1885 aa9.04□□□□□ -0.96
PCDHGA6-201ENST00000517434 KRTAP10-9P60411 292 aa9.04□□□□□ -0.96
PCDHGA6-201ENST00000517434 JMJD1CQ15652 2540 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 COL4A2P08572 1712 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 K7ERS5 55 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 DOPEY1Q5JWR5 2465 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 CRIP2P52943 208 aaPredicted RBP9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 CFAP54Q96N23 3096 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 PRR4Q16378 134 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 LINC00482Q8N8I6 264 aa9.03□□□□□ -0.96
PCDHGA6-201ENST00000517434 CDSNQ15517 529 aa9.02□□□□□ -0.97
PCDHGA6-201ENST00000517434 A0A087WVE0 104 aa9.02□□□□□ -0.97
PCDHGA6-201ENST00000517434 REG3AQ06141 175 aa9.02□□□□□ -0.97
PCDHGA6-201ENST00000517434 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
PCDHGA6-201ENST00000517434 FRYLO94915 3013 aa9.01□□□□□ -0.97
PCDHGA6-201ENST00000517434 TRBV7-7A0A0K0K1E9 115 aa9.01□□□□□ -0.97
PCDHGA6-201ENST00000517434 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
PCDHGA6-201ENST00000517434 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
PCDHGA6-201ENST00000517434 RPS28P62857 69 aaKnown RBP9.01□□□□□ -0.97
PCDHGA6-201ENST00000517434 SMIM11BQ8TCY0 68 aa9□□□□□ -0.97
PCDHGA6-201ENST00000517434 BRI3O95415 125 aa9□□□□□ -0.97
PCDHGA6-201ENST00000517434 Q6ZQY7 126 aa9□□□□□ -0.97
PCDHGA6-201ENST00000517434 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA6-201ENST00000517434 EXPH5Q8NEV8 1989 aa8.99□□□□□ -0.97
PCDHGA6-201ENST00000517434 A8MZ25 164 aa8.99□□□□□ -0.97
PCDHGA6-201ENST00000517434 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
PCDHGA6-201ENST00000517434 MRGPRG-AS1Q2M3A8 158 aa8.98□□□□□ -0.97
PCDHGA6-201ENST00000517434 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
PCDHGA6-201ENST00000517434 TSHBP01222 138 aa8.98□□□□□ -0.97
PCDHGA6-201ENST00000517434 WFDC10BQ8IUB3 73 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 GAS8-AS1O95177 125 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 AVPP01185 164 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 C10orf99Q6UWK7 81 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 PRYO14603 147 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 IGHV4-30-4P0DP06 118 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 CASC2Q6XLA1 102 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 C1orf229Q6ZS94 237 aaPredicted RBP8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 TLN2Q9Y4G6 2542 aa8.97□□□□□ -0.97
PCDHGA6-201ENST00000517434 IGIPA6NJ69 53 aa8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 POM121L12Q8N7R1 296 aa8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 Q8N9L7 120 aa8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 BBC3Q96PG8 261 aaPredicted RBP8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 LELP1Q5T871 98 aa8.96□□□□□ -0.97
PCDHGA6-201ENST00000517434 LY6G6CO95867 125 aa8.96□□□□□ -0.98
PCDHGA6-201ENST00000517434 CRYGAP11844 174 aa8.96□□□□□ -0.98
PCDHGA6-201ENST00000517434 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
PCDHGA6-201ENST00000517434 SMR3AQ99954 134 aa8.96□□□□□ -0.98
PCDHGA6-201ENST00000517434 TRBV6-8A0A0A6YYG3 113 aa8.96□□□□□ -0.98
PCDHGA6-201ENST00000517434 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms