RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PLNP26678 52 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 KRTDAPP60985 99 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CKS1BP61024 79 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 HERVK_113P61574 105 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 FOXI1Q12951 378 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 HIGD2BQ4VC39 106 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C6orf226Q5I0X4 101 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LINC00242Q5T6M2 205 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 Q6ZRN7 208 aaPredicted RBP3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 Q8N814 137 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 NTN5Q8WTR8 489 aaPredicted RBP3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 ORAOV1Q8WV07 137 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TOMM7Q9P0U1 55 aa3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 TMA7Q9Y2S6 64 aaKnown RBP3.62□□□□□ -1.83
SCARNA16.4-201ENST00000516956 A0A087WZ39 114 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 A0A096LNJ9 63 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 F8VRH5 84 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 DPM2O94777 84 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SNRPEP62304 92 aaKnown RBP3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CDPF1Q6NVV7 123 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SPATA12Q7Z6I5 190 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LINC01561Q8N1V8 128 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 OR10D4PQ8NGN7 298 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 DPH3Q96FX2 82 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CAMK2N2Q96S95 79 aa3.61□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGHV3-64A0A075B6Q5 118 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C16orf90A8MZG2 172 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 F8WDY8 70 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SYS1-DBNDD2H3BUS1 97 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 NDUFA1O15239 70 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGKCP01834 107 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGLC3P0DOY3 106 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LINC00310P59036 64 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 COX6A2Q02221 97 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SYCNQ0VAF6 134 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 FAM19A3Q7Z5A8 133 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 MRPL35Q9NZE8 188 aaKnown RBP3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CDKN2A-AS1Q9UH64 79 aa3.6□□□□□ -1.83
SCARNA16.4-201ENST00000516956 IGLV4-69A0A075B6H9 119 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 LRCOL1A6NCL2 159 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 HSBP1L1C9JCN9 74 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 SPINK8P0C7L1 97 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 GCSHP23434 173 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CXCL5P42830 114 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 KRTAP26-1Q6PEX3 210 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 HIST3H2BBQ8N257 126 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 COX7B2Q8TF08 81 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C2orf48Q96LS8 159 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 CARD19Q96LW7 228 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.83
SCARNA16.4-201ENST00000516956 C11orf86A6NJI1 115 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C3orf79P0CE67 100 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ZNF22P17026 224 aaPredicted RBP3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ODF1Q14990 250 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 Q8IZM0 81 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C15orf56Q8N910 161 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 PLEKHB2Q96CS7 222 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 HIST1H2BLQ99880 126 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 PMCHL2Q9BQD1 86 aa3.58□□□□□ -1.84
SCARNA16.4-201ENST00000516956 IGLV5-45A0A087WSX0 123 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LOC107984640A0A0U1RRK4 108 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C5orf52A6NGY3 159 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC00587B1AMM8 73 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 SMIM1B2RUZ4 78 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LGALS3P17931 250 aaKnown RBP3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 CNBPP62633 177 aaKnown RBP3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 WFDC2Q14508 124 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC00526Q96FQ7 95 aa3.57□□□□□ -1.84
SCARNA16.4-201ENST00000516956 ALMS1Q8TCU4 4167 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 TRBV30A0A0K0K1B3 111 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 MYMXA0A1B0GTQ4 84 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LEPROTO15243 131 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 KRTAP10-2P60368 255 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 RPL18AQ02543 176 aaKnown RBP3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 CIRBPQ14011 172 aaKnown RBP3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 RNF151Q2KHN1 245 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 MEIG1Q5JSS6 88 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 DYNC2H1Q8NCM8 4307 aaKnown RBP3.56□□□□□ -1.84
SCARNA16.4-201ENST00000516956 FUSP35637 526 aaKnown RBP eCLIP3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 NMUP48645 174 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 HERV-K104P63124 156 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 GAGE2BQ13066 116 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C2orf82Q6UX34 121 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 UNQ6190/PRO20217Q6UXQ8 127 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 Q6ZRU5 148 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
SCARNA16.4-201ENST00000516956 IGKV2-24A0A0C4DH68 120 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms