RNA–Protein interactions for RNA: ENST00000516674.1

RNU6-1178P-201, Transcript of RNA, U6 small nuclear 1178, pseudogene, humanhuman

BASIC

Gene RNU6-1178P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1178P-201ENST00000516674 SHANK2Q9UPX8 1470 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 GOLGA4Q13439 2230 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 SPRR2EP22531 72 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 KRTAP19-6Q3LI70 58 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 PFDN5Q99471 154 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 MGST2Q99735 147 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 RERGLQ9H628 205 aa-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 CNOT1A5YKK6 2376 aaKnown RBP-0.92□□□□□ -2.56
RNU6-1178P-201ENST00000516674 PKHD1L1Q86WI1 4243 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 SPINK4O60575 86 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DYNLRB1Q9NP97 96 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 SERP1Q9Y6X1 66 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 LINC01558Q9Y6Z2 57 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 GAPVD1Q14C86 1478 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 RAPGEF6Q8TEU7 1601 aa-0.93□□□□□ -2.56
RNU6-1178P-201ENST00000516674 ANK3Q12955 4377 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 MYO18BQ8IUG5 2567 aa-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 MXRA5Q9NR99 2828 aa-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 ARPC4P59998 168 aa-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 LSM10Q969L4 123 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 SNRNP25Q9BV90 132 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DNAH6Q9C0G6 4158 aa-0.94□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DYNC1H1Q14204 4646 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1178P-201ENST00000516674 TRBV7-3A0A075B6L6 115 aa-0.95□□□□□ -2.56
RNU6-1178P-201ENST00000516674 LOC285095A0A1B0GVY8 99 aa-0.95□□□□□ -2.56
RNU6-1178P-201ENST00000516674 IGLC7A0M8Q6 106 aa-0.95□□□□□ -2.56
RNU6-1178P-201ENST00000516674 SPRR2AP35326 72 aa-0.95□□□□□ -2.56
RNU6-1178P-201ENST00000516674 VPS13DQ5THJ4 4388 aa-0.96□□□□□ -2.56
RNU6-1178P-201ENST00000516674 NBPF19A0A087WUL8 3843 aa-0.96□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DEFA5Q01523 94 aa-0.96□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DNAH3Q8TD57 4116 aa-0.96□□□□□ -2.56
RNU6-1178P-201ENST00000516674 CUBNO60494 3623 aa-0.96□□□□□ -2.56
RNU6-1178P-201ENST00000516674 KDM5AP29375 1690 aaKnown RBP-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 DNAJC13O75165 2243 aa-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 TULP4Q9NRJ4 1543 aa-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 M0R2T5 61 aa-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 PPP3R2Q96LZ3 170 aa-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 NAA60Q9H7X0 242 aa-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 NIPBLQ6KC79 2804 aaeCLIP-0.97□□□□□ -2.56
RNU6-1178P-201ENST00000516674 POLA1P09884 1462 aaPredicted RBP-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 IQSEC2Q5JU85 1478 aa-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 ARHGEF12Q9NZN5 1544 aa-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 HMGN4O00479 90 aa-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 APOBP04114 4563 aaKnown RBP-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MYOM1P52179 1685 aa-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 WDR87Q6ZQQ6 2873 aa-0.98□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SFT2D2O95562 160 aa-0.99□□□□□ -2.57
RNU6-1178P-201ENST00000516674 TMEM263Q8WUH6 116 aaKnown RBP-0.99□□□□□ -2.57
RNU6-1178P-201ENST00000516674 PKD1P98161 4303 aa-0.99□□□□□ -2.57
RNU6-1178P-201ENST00000516674 CPSF1Q10570 1443 aaKnown RBP-0.99□□□□□ -2.57
RNU6-1178P-201ENST00000516674 NSD3Q9BZ95 1437 aa-0.99□□□□□ -2.57
RNU6-1178P-201ENST00000516674 PCNX1Q96RV3 2341 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 LAMA1P25391 3075 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 TRBV7-4A0A0J9YYF1 115 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 LOC105371267A0A1B0GV96 52 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MGPP08493 103 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SELENOWP63302 87 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 BTG2P78543 158 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SPANXDQ9BXN6 97 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 FXYD6Q9H0Q3 95 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 BICRAQ9NZM4 1560 aa-1□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SSSCA1O60232 199 aa-1.01□□□□□ -2.57
RNU6-1178P-201ENST00000516674 Q56UQ5 140 aa-1.01□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SPRR2FQ96RM1 72 aa-1.01□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MT1HL1P0DM35 61 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MRPL54Q6P161 138 aaKnown RBP-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 TSLPQ969D9 159 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 ARL11Q969Q4 196 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 LINC00470Q9BZP3 86 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 UNC13AQ9UPW8 1703 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 DNAH5Q8TE73 4624 aa-1.02□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SACSQ9NZJ4 4579 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MAGI1Q96QZ7 1491 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 ANKRD11Q6UB99 2663 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MEIG1Q5JSS6 88 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 COMMD6Q7Z4G1 85 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 C8orf59Q8N0T1 100 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 DEFB105AQ8NG35 78 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 SPRR4Q96PI1 79 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 MGAM2Q2M2H8 2515 aa-1.03□□□□□ -2.57
RNU6-1178P-201ENST00000516674 RIF1Q5UIP0 2472 aaKnown RBP-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 NAIPQ13075 1403 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 SMG6Q86US8 1419 aaKnown RBP-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 FAM25AB3EWG3 89 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 FAM25CB3EWG5 89 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 FAM25GB3EWG6 89 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 WHAMMP3Q1A5X7 153 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 C5orf38Q86SI9 138 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 NXT2Q9NPJ8 142 aaKnown RBP-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 FAIMQ9NVQ4 179 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 CCDC168Q8NDH2 2452 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 KIAA0556O60303 1618 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 SHROOM2Q13796 1616 aa-1.04□□□□□ -2.58
RNU6-1178P-201ENST00000516674 PSME4Q14997 1843 aa-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 MIF4GDA9UHW6 222 aaKnown RBP-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 COX8AP10176 69 aa-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 C10orf113Q5VZT2 155 aa-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 AKAP13Q12802 2813 aa-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 SETBP1Q9Y6X0 1596 aa-1.05□□□□□ -2.58
RNU6-1178P-201ENST00000516674 CMYA5Q8N3K9 4069 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms